PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386045.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 877aa MW: 96861 Da PI: 8.5016

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.8	1.4e-18	788	868	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++Li++r +++ +++ k ++ lWee+s +++ g++r+p qCk+ w +l ++y++ k ek s ++pyf+++e XP_026386045.1 788 KWKPEEIKKLIKMRGDLDVKFQVVKGRMVLWEEISTNLQGYGINRTPSQCKSLWTSLLQKYEESKIDEKT-----SGSWPYFTDME 868 7***********************************************************99999986.....557*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 877 aa Download sequence
MAALNALSLC PCKFSSCLRN PRSKPSVSCS VGVPSISGTR IPMSKSIRRE GPGKSMADSV 60 QRKMEKFYEG SDGPPIRVLP IGGLGEIGMN CMLVGNNDRY ILIDAGVMFP DDDELGVQKI 120 IPDTTFIRRW SHKIEAVVIT HGHEDHIGAL PWVIPALDSH TPIFASSFTM ELIKKRLKEF 180 GIFTSRLKPF KAKKKFTAGP FEVEPIRVTH SIPDCCGLVL RCKDGTILHT GDWKIDESPL 240 DGKVFDRETL EDLSKEGVTL MMSDSTNVLS PGRTISENVV RDALLRNISA ATGRVITTQF 300 ASNIHRLGSV KAAADLTGRK LVFVGMSLRT YLDAAFRDGQ APIDPSTLVK VEDIDNYAPK 360 DLLIVTTGSQ AEPRAALNLA SYGSSHSLKL TKDDLILYSA KVIPGNETRV MKMMNRISEL 420 GSTIVMGKSE GLHTSGHAYR GELEEVLRLV KPQHFLPIHG ELLFLKEHEL LGKSTGINHT 480 TVIKNGEMLG VSHLRNRRVL SQGYANGLIP LGKENLQLMY SDGDKAFGTS SELCIDERLR 540 IATDGIIIVS MEIMRPETSN SAVAPTIKGK IKITTRCLWL DKGKLLDALH KTANAALSSC 600 PINCPLAHME RTVSEVLRKM VRKYSSKRPE VIVNAMENPS AVIAEELKEK LSGKSRGDYG 660 TSALNKADDA HPRQKRSSKR IEEGKADTYL RKNTTQQDVK GKSIDERLLQ EEDTTVSSSD 720 STSSASSIEG DTDDFWKSCV IKSPIQGESG LVEKNLVLNQ DGSESNEDES AESSNPEKAS 780 VKPVKRNKWK PEEIKKLIKM RGDLDVKFQV VKGRMVLWEE ISTNLQGYGI NRTPSQCKSL 840 WTSLLQKYEE SKIDEKTSGS WPYFTDMEKI LSDRESA

Sequence ? help Back to Top

Protein Sequence Length: 877 aa Download sequence

MAALNALSLC PCKFSSCLRN PRSKPSVSCS VGVPSISGTR IPMSKSIRRE GPGKSMADSV  60
QRKMEKFYEG SDGPPIRVLP IGGLGEIGMN CMLVGNNDRY ILIDAGVMFP DDDELGVQKI  120
IPDTTFIRRW SHKIEAVVIT HGHEDHIGAL PWVIPALDSH TPIFASSFTM ELIKKRLKEF  180
GIFTSRLKPF KAKKKFTAGP FEVEPIRVTH SIPDCCGLVL RCKDGTILHT GDWKIDESPL  240
DGKVFDRETL EDLSKEGVTL MMSDSTNVLS PGRTISENVV RDALLRNISA ATGRVITTQF  300
ASNIHRLGSV KAAADLTGRK LVFVGMSLRT YLDAAFRDGQ APIDPSTLVK VEDIDNYAPK  360
DLLIVTTGSQ AEPRAALNLA SYGSSHSLKL TKDDLILYSA KVIPGNETRV MKMMNRISEL  420
GSTIVMGKSE GLHTSGHAYR GELEEVLRLV KPQHFLPIHG ELLFLKEHEL LGKSTGINHT  480
TVIKNGEMLG VSHLRNRRVL SQGYANGLIP LGKENLQLMY SDGDKAFGTS SELCIDERLR  540
IATDGIIIVS MEIMRPETSN SAVAPTIKGK IKITTRCLWL DKGKLLDALH KTANAALSSC  600
PINCPLAHME RTVSEVLRKM VRKYSSKRPE VIVNAMENPS AVIAEELKEK LSGKSRGDYG  660
TSALNKADDA HPRQKRSSKR IEEGKADTYL RKNTTQQDVK GKSIDERLLQ EEDTTVSSSD  720
STSSASSIEG DTDDFWKSCV IKSPIQGESG LVEKNLVLNQ DGSESNEDES AESSNPEKAS  780
VKPVKRNKWK PEEIKKLIKM RGDLDVKFQV VKGRMVLWEE ISTNLQGYGI NRTPSQCKSL  840
WTSLLQKYEE SKIDEKTSGS WPYFTDMEKI LSDRESA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein