PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386044.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 880aa MW: 97116.3 Da PI: 8.5016

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.8	1.4e-18	791	871	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++Li++r +++ +++ k ++ lWee+s +++ g++r+p qCk+ w +l ++y++ k ek s ++pyf+++e XP_026386044.1 791 KWKPEEIKKLIKMRGDLDVKFQVVKGRMVLWEEISTNLQGYGINRTPSQCKSLWTSLLQKYEESKIDEKT-----SGSWPYFTDME 871 7***********************************************************99999986.....557*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MAALNALSLC PCKFSSCLRN PRSKPSVSCS VGVPSISGTP GTRIPMSKSI RREGPGKSMA 60 DSVQRKMEKF YEGSDGPPIR VLPIGGLGEI GMNCMLVGNN DRYILIDAGV MFPDDDELGV 120 QKIIPDTTFI RRWSHKIEAV VITHGHEDHI GALPWVIPAL DSHTPIFASS FTMELIKKRL 180 KEFGIFTSRL KPFKAKKKFT AGPFEVEPIR VTHSIPDCCG LVLRCKDGTI LHTGDWKIDE 240 SPLDGKVFDR ETLEDLSKEG VTLMMSDSTN VLSPGRTISE NVVRDALLRN ISAATGRVIT 300 TQFASNIHRL GSVKAAADLT GRKLVFVGMS LRTYLDAAFR DGQAPIDPST LVKVEDIDNY 360 APKDLLIVTT GSQAEPRAAL NLASYGSSHS LKLTKDDLIL YSAKVIPGNE TRVMKMMNRI 420 SELGSTIVMG KSEGLHTSGH AYRGELEEVL RLVKPQHFLP IHGELLFLKE HELLGKSTGI 480 NHTTVIKNGE MLGVSHLRNR RVLSQGYANG LIPLGKENLQ LMYSDGDKAF GTSSELCIDE 540 RLRIATDGII IVSMEIMRPE TSNSAVAPTI KGKIKITTRC LWLDKGKLLD ALHKTANAAL 600 SSCPINCPLA HMERTVSEVL RKMVRKYSSK RPEVIVNAME NPSAVIAEEL KEKLSGKSRG 660 DYGTSALNKA DDAHPRQKRS SKRIEEGKAD TYLRKNTTQQ DVKGKSIDER LLQEEDTTVS 720 SSDSTSSASS IEGDTDDFWK SCVIKSPIQG ESGLVEKNLV LNQDGSESNE DESAESSNPE 780 KASVKPVKRN KWKPEEIKKL IKMRGDLDVK FQVVKGRMVL WEEISTNLQG YGINRTPSQC 840 KSLWTSLLQK YEESKIDEKT SGSWPYFTDM EKILSDRESA

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MAALNALSLC PCKFSSCLRN PRSKPSVSCS VGVPSISGTP GTRIPMSKSI RREGPGKSMA  60
DSVQRKMEKF YEGSDGPPIR VLPIGGLGEI GMNCMLVGNN DRYILIDAGV MFPDDDELGV  120
QKIIPDTTFI RRWSHKIEAV VITHGHEDHI GALPWVIPAL DSHTPIFASS FTMELIKKRL  180
KEFGIFTSRL KPFKAKKKFT AGPFEVEPIR VTHSIPDCCG LVLRCKDGTI LHTGDWKIDE  240
SPLDGKVFDR ETLEDLSKEG VTLMMSDSTN VLSPGRTISE NVVRDALLRN ISAATGRVIT  300
TQFASNIHRL GSVKAAADLT GRKLVFVGMS LRTYLDAAFR DGQAPIDPST LVKVEDIDNY  360
APKDLLIVTT GSQAEPRAAL NLASYGSSHS LKLTKDDLIL YSAKVIPGNE TRVMKMMNRI  420
SELGSTIVMG KSEGLHTSGH AYRGELEEVL RLVKPQHFLP IHGELLFLKE HELLGKSTGI  480
NHTTVIKNGE MLGVSHLRNR RVLSQGYANG LIPLGKENLQ LMYSDGDKAF GTSSELCIDE  540
RLRIATDGII IVSMEIMRPE TSNSAVAPTI KGKIKITTRC LWLDKGKLLD ALHKTANAAL  600
SSCPINCPLA HMERTVSEVL RKMVRKYSSK RPEVIVNAME NPSAVIAEEL KEKLSGKSRG  660
DYGTSALNKA DDAHPRQKRS SKRIEEGKAD TYLRKNTTQQ DVKGKSIDER LLQEEDTTVS  720
SSDSTSSASS IEGDTDDFWK SCVIKSPIQG ESGLVEKNLV LNQDGSESNE DESAESSNPE  780
KASVKPVKRN KWKPEEIKKL IKMRGDLDVK FQVVKGRMVL WEEISTNLQG YGINRTPSQC  840
KSLWTSLLQK YEESKIDEKT SGSWPYFTDM EKILSDRESA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein