PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026385489.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 256aa    MW: 29326.2 Da    PI: 9.6636
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026385489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.6e-0580102223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+++F+++ +L  H +  H
  XP_026385489.1  80 SCSVCSRVFPTSRLLSIHVSEaH 102
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAMVAERNEL GFPYWNPVSR KFRPDSPFFA SGNIERELLA KQDMEDEESR ALYCPIVGCG  60
ARLNSLEDFE GHYHARHTAS CSVCSRVFPT SRLLSIHVSE AHDSFFQAKV ARGYLMYECL  120
VEGCEMKLKS YKSRQQHLVD KHKFPMSFEF FKKAQASKKH RQKKHHKQKQ PDKKNSNKIS  180
KKDVKEDDTE AEAEASKMDV DKTIDSLVSG VSRLSTSDDS PSSVSFGRRR NQVFTFVPRA  240
VQQDRKHNPS VKGSEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.15e-86C2H2 family protein