PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385455.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 438aa MW: 48355.3 Da PI: 8.3173

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.5	2.8e-41	131	207	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++++yhrrhkvCe+hsk+p+vlv+g+eqrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+ XP_026385455.1 131 CLVDGCNADLSKCRDYHRRHKVCEAHSKTPKVLVAGQEQRFCQQCSRFHFLVEFDEVKRSCRKRLDGHNKRRRKPQP 207 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MDWEFKGTSW GFGEFQRDSS EHSNFTTSTN TTSASAINTL AGSSSSGGDN NNNHLKQKNR 60 SRDNNNCSVD LKLGRLADFG EVYAMNHNKW NDPRLTMFST SSSSSAAATT LSSMKRARSS 120 SSSNGVQVPS CLVDGCNADL SKCRDYHRRH KVCEAHSKTP KVLVAGQEQR FCQQCSRFHF 180 LVEFDEVKRS CRKRLDGHNK RRRKPQPDPL SANSVNLFSY HQGTRILPFA NPQVFPSTTV 240 TSPSWHAVVK TEEETITDSN HLQSHYANRQ NMFPGSFSRT NKEGKQFPFL QVNEHGNRMV 300 PEVSSCQPLI NNVAACSENI SSTSRKLFSD GLTRVLDSDC ALSLLSSPPS QQRSGSSLSH 360 VVQSDSIPMS QPLVSDLEQY NQQGLSRYHQ SQQGMGGETI GSVLVSHATD AELNCQGLFH 420 MGPNGNGSSQ NGIPFSWE

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MDWEFKGTSW GFGEFQRDSS EHSNFTTSTN TTSASAINTL AGSSSSGGDN NNNHLKQKNR  60
SRDNNNCSVD LKLGRLADFG EVYAMNHNKW NDPRLTMFST SSSSSAAATT LSSMKRARSS  120
SSSNGVQVPS CLVDGCNADL SKCRDYHRRH KVCEAHSKTP KVLVAGQEQR FCQQCSRFHF  180
LVEFDEVKRS CRKRLDGHNK RRRKPQPDPL SANSVNLFSY HQGTRILPFA NPQVFPSTTV  240
TSPSWHAVVK TEEETITDSN HLQSHYANRQ NMFPGSFSRT NKEGKQFPFL QVNEHGNRMV  300
PEVSSCQPLI NNVAACSENI SSTSRKLFSD GLTRVLDSDC ALSLLSSPPS QQRSGSSLSH  360
VVQSDSIPMS QPLVSDLEQY NQQGLSRYHQ SQQGMGGETI GSVLVSHATD AELNCQGLFH  420
MGPNGNGSSQ NGIPFSWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	205	KRSCRKRLDGHNKRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-53	SBP family protein