PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385404.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 392aa MW: 45059.8 Da PI: 6.3904

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.5	8.7e-19	76	159	1	83
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++ + +Li+++ + +e+ ++ l k++W++vs++m+++gf+++pkqC++k+ +lnkry+++ + + ++++++ ++ + XP_026385404.1 76 KWTDETTNLLIKLVYYAGEERKSVILLKGKWKAVSQVMSDKGFSVTPKQCEDKFHELNKRYRRLIDLLGWDdACKVVEDHAVMK 159 7**************************************************************988765443566666665555 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MEFEIVSPEL EREDDRIIPT LLGRRRSRRQ RDEINQMEGS TSSAGPMHVD HQQHPQTLHQ 60 QHTSQNLQGS SCQRIKWTDE TTNLLIKLVY YAGEERKSVI LLKGKWKAVS QVMSDKGFSV 120 TPKQCEDKFH ELNKRYRRLI DLLGWDDACK VVEDHAVMKT MDISLKAKAD VWKSLKSKHL 180 FFEEMTSYYN GHLPSDPELR KSLQRALRSD DDHDTRNVLE DVNEDDSWTL DKHAQHTSDS 240 VRDRVPLAIC GPILSGKSPP PDFPAEPYQF LVVNADQTTN QRLLDAAIRE KELADMASLR 300 VQLQREQERA RGLETQLADA KAEQGRVKSL EEEIVQLKNN EAQLNAKITN AEAATTELAR 360 LLAKVKEEYR TELAAKIKEG VKEFIDNIRR EL

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MEFEIVSPEL EREDDRIIPT LLGRRRSRRQ RDEINQMEGS TSSAGPMHVD HQQHPQTLHQ  60
QHTSQNLQGS SCQRIKWTDE TTNLLIKLVY YAGEERKSVI LLKGKWKAVS QVMSDKGFSV  120
TPKQCEDKFH ELNKRYRRLI DLLGWDDACK VVEDHAVMKT MDISLKAKAD VWKSLKSKHL  180
FFEEMTSYYN GHLPSDPELR KSLQRALRSD DDHDTRNVLE DVNEDDSWTL DKHAQHTSDS  240
VRDRVPLAIC GPILSGKSPP PDFPAEPYQF LVVNADQTTN QRLLDAAIRE KELADMASLR  300
VQLQREQERA RGLETQLADA KAEQGRVKSL EEEIVQLKNN EAQLNAKITN AEAATTELAR  360
LLAKVKEEYR TELAAKIKEG VKEFIDNIRR EL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	30	GRRRSRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-44	Trihelix family protein