PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026385403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | Trihelix | ||||||||
Protein Properties | Length: 402aa MW: 46210 Da PI: 5.976 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 59.4 | 9.1e-19 | 86 | 169 | 1 | 83 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++ + +Li+++ + +e+ ++ l k++W++vs++m+++gf+++pkqC++k+ +lnkry+++ + + ++++++ ++ + XP_026385403.1 86 KWTDETTNLLIKLVYYAGEERKSVILLKGKWKAVSQVMSDKGFSVTPKQCEDKFHELNKRYRRLIDLLGWDdACKVVEDHAVMK 169 7**************************************************************988765443566666665555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MEINLNNEPE PEFEIVSPEL EREDDRIIPT LLGRRRSRRQ RDEINQMEGS TSSAGPMHVD 60 HQQHPQTLHQ QHTSQNLQGS SCQRIKWTDE TTNLLIKLVY YAGEERKSVI LLKGKWKAVS 120 QVMSDKGFSV TPKQCEDKFH ELNKRYRRLI DLLGWDDACK VVEDHAVMKT MDISLKAKAD 180 VWKSLKSKHL FFEEMTSYYN GHLPSDPELR KSLQRALRSD DDHDTRNVLE DVNEDDSWTL 240 DKHAQHTSDS VRDRVPLAIC GPILSGKSPP PDFPAEPYQF LVVNADQTTN QRLLDAAIRE 300 KELADMASLR VQLQREQERA RGLETQLADA KAEQGRVKSL EEEIVQLKNN EAQLNAKITN 360 AEAATTELAR LLAKVKEEYR TELAAKIKEG VKEFIDNIRR EL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 40 | GRRRSRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 2e-44 | Trihelix family protein |