PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026385390.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 525aa    MW: 58084.2 Da    PI: 7.5007
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026385390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26028.83.5e-09688190
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpa.eqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
                    +C aCk+lrr C+++C++ + f    ++ kf++             ++++++ e +++ s+l++eA+a +++P  Ga+g++l+l+q+++++
  XP_026385390.1  6 QCLACKYLRRPCSEGCPYIQLFSTyFDAPKFQI--------GYAASIADIQKIEARITDSTLTFEANAGVNEPLVGATGILLALHQRMREE 88
                    6********************966356777775........345566777888899999**************************999876 PP
2DUF26043.21.1e-13125229199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkf..anvhklFGasnvlkllkal....peeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                     aC aC +l +kC+ dC++ p f a+++++f  ++   l G + vl   ++l    + ++  +++++l +e++ar++dPvyG +g+il+l ++  +
  XP_026385390.1 125 ACPACTYLPQKCKVDCPFVPFFEARKSRDFirEFCTVLCGSTAVLPDHSNLqsadELNKAGITAKALEFESKARVHDPVYGITGIILSLYKNWWN 219
                     6*************************9999656899999**9998665555221233446899****************************9999 PP

          DUF260  90 lkaelallke 99 
                     l++++ ll++
  XP_026385390.1 220 LNHHVRLLEQ 229
                     9998887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    
MGDHGQCLAC KYLRRPCSEG CPYIQLFSTY FDAPKFQIGY AASIADIQKI EARITDSTLT  60
FEANAGVNEP LVGATGILLA LHQRMREEVT RFETITGKGV NVIPAGTMNH VILKDSEKIE  120
QQHRACPACT YLPQKCKVDC PFVPFFEARK SRDFIREFCT VLCGSTAVLP DHSNLQSADE  180
LNKAGITAKA LEFESKARVH DPVYGITGII LSLYKNWWNL NHHVRLLEQR HRSVQNFPTV  240
QIGSCNIPTD KGKGNVTPES TNECCTIAEW MDMEDDDESL YSREENVQGI PLLSQPWGAL  300
VQGIPLRISE NVPQNVPSQL QRQLSAPYIQ QSTSSSLRAP TSSSQRMSST GRALQRASTP  360
QQREAWGQLL GRPPVQHIPQ NVPSELQQLA APSHSQQAAS SSLREAPSSQ QGMSSTTGEA  420
INRAWQNLTR QEREELLRQT WNRLPDTSHV QNLVQRFPDR PSVQDILQRT SQRVPHSVIP  480
QLQQQLAAPS HGQLATSSSL RAATSSQQGT SSSTGTPPTS TTDTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.11e-09LBD family protein