PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026385353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 482aa MW: 53965.5 Da PI: 6.5049 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 26.2 | 2.2e-08 | 6 | 89 | 1 | 91 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpa.eqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 +C aCk++rr C+++C++ + f + +f++ ++ ++ ++ e +++ s+l++eA+a +++Pv Ga+g++l+l+q+++++ XP_026385353.1 6 QCLACKFMRRPCSEGCPYIQLFSTyFDVPSFQI-------GYAAST-ADRQKIEARITDSTLTFEANAGVNEPVFGATGILLALHQRMREEV 89 6*****************999965233444443.......333333.3336667789999*************************9998765 PP | |||||||
2 | DUF260 | 40.5 | 8e-13 | 125 | 229 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkf..anvhklFGasnvlkllkal....peeeredamsslvyeAearardPvyGavgvilklqqqleq 89 aC aC +l + C+ dC++ p f a+++++f ++ l G + vl ++l + ++ +++++l +e++ar++dPvyG +g+il+l ++ + XP_026385353.1 125 ACPACTYLPQMCKVDCPFVPFFEARKSRDFirEFCTVLCGSTVVLPDHSNLqsadELNKAGITAKALEFESKARVHDPVYGIAGIILSLYKNWWN 219 6************************99998556788889998887555555221233446899****************************9999 PP DUF260 90 lkaelallke 99 l++++ ll++ XP_026385353.1 220 LNHHVRLLEQ 229 9998887765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence |
MGDHGQCLAC KFMRRPCSEG CPYIQLFSTY FDVPSFQIGY AASTADRQKI EARITDSTLT 60 FEANAGVNEP VFGATGILLA LHQRMREEVT RFETITGKGV NVIPADTMNH FVLKDSEKIE 120 QKHRACPACT YLPQMCKVDC PFVPFFEARK SRDFIREFCT VLCGSTVVLP DHSNLQSADE 180 LNKAGITAKA LEFESKARVH DPVYGIAGII LSLYKNWWNL NHHVRLLEQR HRSVQNFPTV 240 QIGSCNIPTD KGKGNVTPES TNERCTIAEW MDMEDDDESL YSREEVSKNY MEFQQEVALI 300 QPLPQERTYS LCLPQGESSK SSPLSSVPHQ MNQPLADQQL YRVPQQTQQL LSQQAASSSL 360 REAPSSQQGM SSTTGEAINR AWQNLTRQER EELLRQTWNR LPGTSHVQNL LQRFPDRPSV 420 QDILQRTSER VPHSVTPQLQ QQLASPSYGQ QAASSSLRAA TSSQQGTSSS TGTPPTSTTD 480 TI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45410.1 | 3e-08 | LBD family protein |