PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384921.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 774aa MW: 89375.9 Da PI: 9.468

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.6	4.3e-18	79	165	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 fYn+YA GFsvrksks+ n++ +r fvC egkr+ +++++ + +++raetr +C a++k++ + + ++v+++ +H+H XP_026384921.1 79 FYNTYAFYFGFSVRKSKSHFF-SNKKLRDRLFVCHAEGKRDVDTRDAADVKSHRAETRFECLARMKISCVSnGDMYRVIEFIPNHTHV 165 ***************9998.6777****************99*****************998999**********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 774 aa Download sequence
MQLQQGLHNG AQLEEDDLQV RRKLDLGKGI DLNISLDDIS TEESNENVAC VESIHSRIRK 60 EQIPVLGMEF ETVDKAYTFY NTYAFYFGFS VRKSKSHFFS NKKLRDRLFV CHAEGKRDVD 120 TRDAADVKSH RAETRFECLA RMKISCVSNG DMYRVIEFIP NHTHVTSSPS KTHLFRSHRK 180 MSAINIAQAE MADRSGINPK ETVEFMSRQA GGREHLGFIP LDYKNYFRTK RTREMKTGDT 240 GGVLEYLQKK KLADPNFLYA IQVDKEDLIT NIFWADARTM VDYDYFGDVV CFDTTFRKNK 300 EGRPFAMFVG VNHHKQSVIF GAALLYDETA ETFEWLFDIF AKTMSGKKPK SIFTDQDAAM 360 AKALASEWPE TTHRLCIWHI FQNAAKHLSH VFEKFDNFAK EFSNCVYDYE EEKEFIDAWK 420 NMLEKYKLQD NEWFSRLFNI KEKWALVYGR NTFSAEITTT QRSESLNSLV KKYVNYKYDM 480 LRFFRRFEGL VDDRRYEELK ADFKASQSFP ALSFPVKILK HAAIVYTHEV LKLFQKQLCR 540 AHDCTVNYLG DTSMTVRKYG VIPHAQEYHR TVIFDMENNN ISCSRRKFEF AGIFCSHALK 600 VLSLHNIKSI PTQYILKRWT KDVKSGSVKI SPIATTANDP KGDIIKRYRE LCRLHVQLAT 660 RASESSEAYE IALSGFNNTL AKVDDILRGI TTKENSQPML PTTNNLENPS VVVPIHGDNG 720 NVRGIKIKEK EVGVSSKRPQ SGLETETNKK KKGALQTATT KQKRARRTLL DPKK

Sequence ? help Back to Top

Protein Sequence Length: 774 aa Download sequence

MQLQQGLHNG AQLEEDDLQV RRKLDLGKGI DLNISLDDIS TEESNENVAC VESIHSRIRK  60
EQIPVLGMEF ETVDKAYTFY NTYAFYFGFS VRKSKSHFFS NKKLRDRLFV CHAEGKRDVD  120
TRDAADVKSH RAETRFECLA RMKISCVSNG DMYRVIEFIP NHTHVTSSPS KTHLFRSHRK  180
MSAINIAQAE MADRSGINPK ETVEFMSRQA GGREHLGFIP LDYKNYFRTK RTREMKTGDT  240
GGVLEYLQKK KLADPNFLYA IQVDKEDLIT NIFWADARTM VDYDYFGDVV CFDTTFRKNK  300
EGRPFAMFVG VNHHKQSVIF GAALLYDETA ETFEWLFDIF AKTMSGKKPK SIFTDQDAAM  360
AKALASEWPE TTHRLCIWHI FQNAAKHLSH VFEKFDNFAK EFSNCVYDYE EEKEFIDAWK  420
NMLEKYKLQD NEWFSRLFNI KEKWALVYGR NTFSAEITTT QRSESLNSLV KKYVNYKYDM  480
LRFFRRFEGL VDDRRYEELK ADFKASQSFP ALSFPVKILK HAAIVYTHEV LKLFQKQLCR  540
AHDCTVNYLG DTSMTVRKYG VIPHAQEYHR TVIFDMENNN ISCSRRKFEF AGIFCSHALK  600
VLSLHNIKSI PTQYILKRWT KDVKSGSVKI SPIATTANDP KGDIIKRYRE LCRLHVQLAT  660
RASESSEAYE IALSGFNNTL AKVDDILRGI TTKENSQPML PTTNNLENPS VVVPIHGDNG  720
NVRGIKIKEK EVGVSSKRPQ SGLETETNKK KKGALQTATT KQKRARRTLL DPKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-112	FAR1 family protein