PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026384909.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 213aa MW: 23248.4 Da PI: 6.9692 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.8 | 1.2e-40 | 40 | 139 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+l+rkC+++Cv+apyf +++ +kf vhk+FGasnv+k+l ++p e+red+++slvyeAear+rdPvyG+vg + lq+q+ qlk++la XP_026384909.1 40 SCAACKYLKRKCTPNCVFAPYFKSDELHKFVKVHKVFGASNVSKILGEVPAEQREDTANSLVYEAEARLRDPVYGCVGALALLQNQMIQLKQDLA 134 6*********************************************************************************************9 PP DUF260 96 llkee 100 +++ XP_026384909.1 135 ISRAH 139 98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MQTFRVYKGY IEHGSGEECI LQKSISMKKG QDCPARPAPS CAACKYLKRK CTPNCVFAPY 60 FKSDELHKFV KVHKVFGASN VSKILGEVPA EQREDTANSL VYEAEARLRD PVYGCVGALA 120 LLQNQMIQLK QDLAISRAHL TCYASDTPPL QPPPPPPPSP IISSDYFVDG LLSSDEFAVY 180 DPVSAGSTSN PNYSDCQPHP YSGATPLSAS FPQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11090.1 | 3e-47 | LBD family protein |