PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384144.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 686aa MW: 77275 Da PI: 6.6283

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384144.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.2	8.2e-16	58	144	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++ +k GF v+ks+s k+ g + +++f+C++ gk ++ ++k + r++a+ ++gC+akl+++++ +++++l+leHnHel p XP_026384144.1 58 EFYKTLGKVKGFPVVKSTSVKN-GAGCTRSYKFTCTQAGKCNSISEK---QLRPQATIKCGCQAKLVLRLDCLVGYVISQLNLEHNHELKP 144 6***************9999.777799*******9998766...999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MYIEEIGESS NVENTVSVIA LKPEETFEKS DCIDISGIKS NIQPALGMGF ESIDDAWEFY 60 KTLGKVKGFP VVKSTSVKNG AGCTRSYKFT CTQAGKCNSI SEKQLRPQAT IKCGCQAKLV 120 LRLDCLVGYV ISQLNLEHNH ELKPEFARHF RCNRFIDSLV KNQIDLLDQY GIRLCKSYDV 180 CVNESGGQEN MTCSQKYCRN LIDKLRTARL GEGDAVAILK YFTKMGSQGF RFYSSVDTDD 240 TRHLRSLFLE NGRSREEYKE FCEVISFDTT YLVNRYDMPF ASFVGLNHHG ESILLGCGLV 300 VHEDTNSFIW LFSKWLDCMS GCAPPALITD QAKAMQNAIE IVFPNSRHRW CIWHDGMQST 360 QRSESMNSFL DGYLGPKTTL KQFVEQFERV MRDKAEKETV ADTETWSKLI LTATFFEMET 420 QMLGLYTLSK FKYFQDELTS KMYCELIKQA EDPLGKFKYV TRASVWIEGI DGQKIQKQMN 480 FDVIFYSNIC EVSCSCRVLE FEGMLCRSLN VLIRHGIKLI PDNEVADMAV KSELGFNDLR 540 QLLVIQLDLL KKNTICEIKT KSPATNEKCK GVQESDSPGA DIVDTITVDV DDLIVTDVLN 600 PEDKTKRPGR PRTIIRIKIH ENVTRRILWT AIVGMHALMV VVMVGKGGRS AVGIMVVGVG 660 ENGGVTTLMV AVVVEESSGS GMKKVS

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MYIEEIGESS NVENTVSVIA LKPEETFEKS DCIDISGIKS NIQPALGMGF ESIDDAWEFY  60
KTLGKVKGFP VVKSTSVKNG AGCTRSYKFT CTQAGKCNSI SEKQLRPQAT IKCGCQAKLV  120
LRLDCLVGYV ISQLNLEHNH ELKPEFARHF RCNRFIDSLV KNQIDLLDQY GIRLCKSYDV  180
CVNESGGQEN MTCSQKYCRN LIDKLRTARL GEGDAVAILK YFTKMGSQGF RFYSSVDTDD  240
TRHLRSLFLE NGRSREEYKE FCEVISFDTT YLVNRYDMPF ASFVGLNHHG ESILLGCGLV  300
VHEDTNSFIW LFSKWLDCMS GCAPPALITD QAKAMQNAIE IVFPNSRHRW CIWHDGMQST  360
QRSESMNSFL DGYLGPKTTL KQFVEQFERV MRDKAEKETV ADTETWSKLI LTATFFEMET  420
QMLGLYTLSK FKYFQDELTS KMYCELIKQA EDPLGKFKYV TRASVWIEGI DGQKIQKQMN  480
FDVIFYSNIC EVSCSCRVLE FEGMLCRSLN VLIRHGIKLI PDNEVADMAV KSELGFNDLR  540
QLLVIQLDLL KKNTICEIKT KSPATNEKCK GVQESDSPGA DIVDTITVDV DDLIVTDVLN  600
PEDKTKRPGR PRTIIRIKIH ENVTRRILWT AIVGMHALMV VVMVGKGGRS AVGIMVVGVG  660
ENGGVTTLMV AVVVEESSGS GMKKVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-55	FAR1 family protein