PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384033.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 436aa MW: 50882.2 Da PI: 6.9193

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.2	3.2e-19	83	168	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA++ GFsvr+s+s++ ++g+ +++ +vCs +g+r ++k++ ++ +++raetr +C a+ k+++++++k+ + ++ H+H XP_026384033.1 83 KFYNTYAYNFGFSVRRSTSHSF-NDGKLKEKIYVCSAQGTRVKDKRD-VNVKKHRAETRFECLARTKISLTQTSKYAIVDFYAYHTHI 168 6**************98887.8999*************999.99***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MEPPPPLENS FSDCHRAGSQ IRRRLDFNRD IDLNLSAPEE CYDDEKTNPV SFSKRVDFVH 60 SKILKELIPE IGMEFETEDE AFKFYNTYAY NFGFSVRRST SHSFNDGKLK EKIYVCSAQG 120 TRVKDKRDVN VKKHRAETRF ECLARTKISL TQTSKYAIVD FYAYHTHITT TPSKSHLFRS 180 QRRLSTAIIT QADMADASEI APRETMEFLS RQSGGRQNVG IIPVDYKNYL RSKRTRKMET 240 GDTGDEDDLI TNIFWADSRM IVDYDYFGDV VSFDTTHRKN KDGRPFAMFV GVNNHRQTII 300 FGAALLYDET AETFMWLFDT FAETMSGKKP KSIFTDQDAA MAKALASQWP ESRHRLCIWH 360 MFQNAAKHLS HEFHKFNDFT KDFTKCVYDY EDEVEFTDAW KNMLAKYNLH NNDWLEGLFS 420 LREKWALVYG RDTFCA

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MEPPPPLENS FSDCHRAGSQ IRRRLDFNRD IDLNLSAPEE CYDDEKTNPV SFSKRVDFVH  60
SKILKELIPE IGMEFETEDE AFKFYNTYAY NFGFSVRRST SHSFNDGKLK EKIYVCSAQG  120
TRVKDKRDVN VKKHRAETRF ECLARTKISL TQTSKYAIVD FYAYHTHITT TPSKSHLFRS  180
QRRLSTAIIT QADMADASEI APRETMEFLS RQSGGRQNVG IIPVDYKNYL RSKRTRKMET  240
GDTGDEDDLI TNIFWADSRM IVDYDYFGDV VSFDTTHRKN KDGRPFAMFV GVNNHRQTII  300
FGAALLYDET AETFMWLFDT FAETMSGKKP KSIFTDQDAA MAKALASQWP ESRHRLCIWH  360
MFQNAAKHLS HEFHKFNDFT KDFTKCVYDY EDEVEFTDAW KNMLAKYNLH NNDWLEGLFS  420
LREKWALVYG RDTFCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-81	FAR1 family protein