PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026383964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 166aa MW: 18257.5 Da PI: 5.2257 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 75.8 | 8e-24 | 23 | 93 | 30 | 100 |
DUF260 30 fanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 + +++++FGasn++kll++++ ++reda++sl+yeAear++dPvyG++gvi+ lq+q+++l++el++++++ XP_026383964.1 23 TFMTRRIFGASNITKLLNEISIHQREDAVNSLAYEAEARINDPVYGCIGVISILQNQVRSLREELDVANAN 93 55789************************************************************998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MSHRGFSLDI VLAVYNNVRC GNTFMTRRIF GASNITKLLN EISIHQREDA VNSLAYEAEA 60 RINDPVYGCI GVISILQNQV RSLREELDVA NANLIRLACN GISTSGYALS TSSSVEFNRR 120 IVSIEEEGST SHFIDGRSSC GSELPSLPPP WPEIVKFSGN MNGENF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27650.1 | 2e-32 | LBD family protein |