PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383908.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 532aa MW: 62305.4 Da PI: 9.0889

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.3	5.2e-18	45	126	1	87
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYn+YA++ Fs++k++ kk+ ng ++ ++Cskegk+ + +++ + ++++tgCkak+ ++ d+kw+++ ++l+HnH XP_026383908.1 45 EFYNNYAYRKEFSIKKRTCKKE--NGVLVHVSYTCSKEGKNITASNT---PLNLPPTQKTGCKAKISARLCADDKWMISIISLQHNH 126 6**************99988..9************999887...8889999**************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MNGNELESEE PEKSGNVLDD DSNHDDQIVE PKLGMMFESA DELFEFYNNY AYRKEFSIKK 60 RTCKKENGVL VHVSYTCSKE GKNITASNTP LNLPPTQKTG CKAKISARLC ADDKWMISII 120 SLQHNHLNSP SKARHLRGHK RINTTAKKRV LLNDKAGIRM CKTYGALAVE GGGYENLPYD 180 EKTLRNMIVR EKVLELGEGD ATALLDHFTN MQNKDPNFFY RLDIDGEGRL KNVFWADNKY 240 REAYKEFGEV VTFDTTYLTN KYDMPFAPFV GVNHHGQSIL FGCGLLSNEE KETFAWLFKA 300 WLDCMNGVAP GGIITDQAGA MKIAIELVFK DTKHRWCLWH IMKKIPEKLR RYDNYVRIKS 360 RMKKAIYDSQ CPAEFEERWS EMLEKYEILK QNKWLSKLYR EKDRWVPCFV KTTFWAGIST 420 TQRSESMNAF FDGYVHSRTS LKQFVEKFDN ALRYKKEKEL KTDARSFSKT IPTSTMEKCT 480 FTQCRTYIRR FCHFFANKFE WLVYSKEKLV MFENLKFDVF MLFDNKFNHR PV

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MNGNELESEE PEKSGNVLDD DSNHDDQIVE PKLGMMFESA DELFEFYNNY AYRKEFSIKK  60
RTCKKENGVL VHVSYTCSKE GKNITASNTP LNLPPTQKTG CKAKISARLC ADDKWMISII  120
SLQHNHLNSP SKARHLRGHK RINTTAKKRV LLNDKAGIRM CKTYGALAVE GGGYENLPYD  180
EKTLRNMIVR EKVLELGEGD ATALLDHFTN MQNKDPNFFY RLDIDGEGRL KNVFWADNKY  240
REAYKEFGEV VTFDTTYLTN KYDMPFAPFV GVNHHGQSIL FGCGLLSNEE KETFAWLFKA  300
WLDCMNGVAP GGIITDQAGA MKIAIELVFK DTKHRWCLWH IMKKIPEKLR RYDNYVRIKS  360
RMKKAIYDSQ CPAEFEERWS EMLEKYEILK QNKWLSKLYR EKDRWVPCFV KTTFWAGIST  420
TQRSESMNAF FDGYVHSRTS LKQFVEKFDN ALRYKKEKEL KTDARSFSKT IPTSTMEKCT  480
FTQCRTYIRR FCHFFANKFE WLVYSKEKLV MFENLKFDVF MLFDNKFNHR PV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-97	FAR1 family protein