PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383856.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 436aa MW: 50598.9 Da PI: 8.7882

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.3	1.4e-19	45	126	1	87
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYn+YA++ GFs++k++ kk+ ng ++ ++Cskegk+ + +++ + +++rtgCkak+ ++ d+kw+++ ++l+HnH XP_026383856.1 45 EFYNNYAYRKGFSIKKRTCKKK--NGVLVHVSYTCSKEGKNITASNT---LLNLPPTQRTGCKAKISSRLCADDKWMISIISLQHNH 126 6**************99988..9************999887...888999***************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MNGNELESEE PEKSGNVLDD DSNHDDQIVE PKLGMMFESA DELFEFYNNY AYRKGFSIKK 60 RTCKKKNGVL VHVSYTCSKE GKNITASNTL LNLPPTQRTG CKAKISSRLC ADDKWMISII 120 SLQHNHLNSP SKARHLRGHK RIITTTKKIV LLNDKAGIRM CKTYGALAVE GGGYENLPYD 180 EKTLRNMIAR EKILELGEGD ATALLDHFTN MQNKDPNFFY RLDIYGEGRL KNVFWDDNRC 240 REAYKKFGEV VTFDTTYLTN KYDMPFAPFV GVNHHGQSIL LGCGLLSNEE KETFAWLFKA 300 WLDCMNGIAP GGIITDQSGA MKIAIELVFK DTKHRWCLWH IMKKIPENLR RHDNYVRIKS 360 RMKKAIYDSQ CPVEFEERWS EMLEKYESLK QNKWLRKLYR EKDRWVPCFV KTTFWAGMST 420 TQRSESMNAF FDGYVH

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MNGNELESEE PEKSGNVLDD DSNHDDQIVE PKLGMMFESA DELFEFYNNY AYRKGFSIKK  60
RTCKKKNGVL VHVSYTCSKE GKNITASNTL LNLPPTQRTG CKAKISSRLC ADDKWMISII  120
SLQHNHLNSP SKARHLRGHK RIITTTKKIV LLNDKAGIRM CKTYGALAVE GGGYENLPYD  180
EKTLRNMIAR EKILELGEGD ATALLDHFTN MQNKDPNFFY RLDIYGEGRL KNVFWDDNRC  240
REAYKKFGEV VTFDTTYLTN KYDMPFAPFV GVNHHGQSIL LGCGLLSNEE KETFAWLFKA  300
WLDCMNGIAP GGIITDQSGA MKIAIELVFK DTKHRWCLWH IMKKIPENLR RHDNYVRIKS  360
RMKKAIYDSQ CPVEFEERWS EMLEKYESLK QNKWLRKLYR EKDRWVPCFV KTTFWAGMST  420
TQRSESMNAF FDGYVH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-89	FAR1 family protein