PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026383855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 147aa MW: 17293.2 Da PI: 7.5051 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 72.3 | 1.1e-22 | 37 | 127 | 3 | 90 |
FAR1 3 YneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y eY+++ GF+vr+++++k+ r +++t+ +fvCs+eg++++++ + +k+ r++++ ++gCka+++v ++ gkw+vtk+ eHnH+++ XP_026383855.1 37 YIEYGRNNGFDVRIRSTNKTrVRVDQVTSDHFVCSREGQKTNDTAQgINKKLRNTNTIQCGCKAEMRVLYSEiLGKWRVTKFIDEHNHKFV 127 99************999998556788**************999988778888999999*************99***************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MDVNDGEPQT ENDNFGDTSE EFYHMTFNSF EEARDSYIEY GRNNGFDVRI RSTNKTRVRV 60 DQVTSDHFVC SREGQKTNDT AQGINKKLRN TNTIQCGCKA EMRVLYSEIL GKWRVTKFID 120 EHNHKFVSPE KRIRLRENRY MPEAAKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-11 | FAR1 family protein |