PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026383411.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 227aa MW: 25818.4 Da PI: 6.8468 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 23.7 | 1.2e-07 | 143 | 164 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_026383411.1 143 FCEICGKGFKRDANLRMHMRAH 164 6*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAGTSSLKGN FNSTSDIQIP LFNLSQLHQK MDSLQQFIAE SIDRNSLLGK DEMDMISNEI 60 TSAIHQIIVN GSALISSTQS QTLDGKSPIV PDNFIDQQIF NLSSEKLFEV KKDFTIDEHI 120 DDDENCEIVE LDEVELLGEH VHFCEICGKG FKRDANLRMH MRAHGNQFKT LEALTKQPDK 180 IIIESSDLRK KVRFSCPFVG CSRNKLHKKF RPLKSAVCVK NHFRRSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.2 | 5e-45 | C2H2 family protein |