PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026382819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 231aa MW: 26661 Da PI: 8.7599 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59 | 1.5e-18 | 88 | 171 | 1 | 88 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++++k++GF v ks+ kk+ gei ++tf+C + gkr++ +k + +++a+ ++gC akl++++++ ++++kl+leHnHe XP_026382819.1 88 EFYKAFGKQAGFPVMKSTFKKN-VAGEIRSYTFTCARAGKRDSVCEK---KLHPQATIKCGCLAKLVLRLDYLIGYVISKLVLEHNHE 171 6****************99998.8889**************998766...999**********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MCSVLLVLSF LYYCFSLPSV LLFFLLKKEE ISERRNKMRM VEIEEENSNV KNKEGIPTNS 60 DCIDDDGVKP NIKPVVGMEF KSINDAWEFY KAFGKQAGFP VMKSTFKKNV AGEIRSYTFT 120 CARAGKRDSV CEKKLHPQAT IKCGCLAKLV LRLDYLIGYV ISKLVLEHNH EQNPENARYF 180 RCNRYVNPWV KNQIDLLDRS GVRLYKSYGV CVNGFGGHEN MTWVIFIHQM D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.2 | 2e-13 | FAR1 family protein |