PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382553.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 808aa MW: 94426.6 Da PI: 7.0752

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62	1.8e-19	41	122	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Y++YAk+ GF v k++++++ + g i + +vC++ g++ +++k+ +++r+++ ++Cka ++ ++++++kwe+++l+l+HnH+ XP_026382553.1 41 YKAYAKREGFAVIKRTNRRN-EVGIIRSMMYVCNRAGNPVNKTKN---ISKRRKSNCCDCKAYITARLDDEDKWEISQLKLDHNHT 122 9************99998.7788***********99988...88999999***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MAVVSLDDTE KEAGEKTQNT DEDEWYIGKK FDTHDDLFRS YKAYAKREGF AVIKRTNRRN 60 EVGIIRSMMY VCNRAGNPVN KTKNISKRRK SNCCDCKAYI TARLDDEDKW EISQLKLDHN 120 HTYDPSLSRH YRQHRKVEPH VLRTIDLNDQ SGIPMEKTFR SVVNQYGGYD KVDCSEKDCR 180 NALAEIRRLR LGEGDATALM KYFSKKVKEN SGFYFEVDYD DENQLRNVFW ADGWSREAYK 240 EFGEVISFDA TYMTNDYEMP FTSFFGVNHH GQSIFLGCGL LCNETTETFV RLFKKWLKCM 300 FGCAPREIIT DQCQAMKNAV EIIFPEARHR WCLWHIMKKI PEKFGSYKQG EKIAFALQEA 360 VYDSQTPAEF EESWKKMIDK YNLQQNTWLS NLYPEKEQWL PCFLKDTFWA GMASTQHRES 420 INAFFKGYVN SKTKLKQFVE LCEQALRAKV EKELKEDAES CTKAIPLISS YPFEKQLRDM 480 YTLVKFQEFQ KEIRGKIACE VVDFDEVTEV HKYVIREDIW LDNDFCKKVK FNVTFRKIET 540 NDDSSEEEDG DIAVEVVDDG EGMVDLETDN ESETDDNETN GSETESSGTD DSEKEECVFD 600 KRTDETEATK AKKRKKLVDF DIHCSCQMFE SRGILCKHVI VVLMRNGIRL IPEKYILRRW 660 RKNVTRPHTK LKVSFSCWEL NEQSLRYNQM CLKFSVLADL ASVNDKESKV VNEWLDNRTE 720 ELKAKSIELE KIKINAEDQG DTSAPSYGDP SKKKRRGRKR TKRLKSKRSW KRTKRNPSTK 780 PSQESVTTPT PSNPHDISHQ QHTEATRG

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MAVVSLDDTE KEAGEKTQNT DEDEWYIGKK FDTHDDLFRS YKAYAKREGF AVIKRTNRRN  60
EVGIIRSMMY VCNRAGNPVN KTKNISKRRK SNCCDCKAYI TARLDDEDKW EISQLKLDHN  120
HTYDPSLSRH YRQHRKVEPH VLRTIDLNDQ SGIPMEKTFR SVVNQYGGYD KVDCSEKDCR  180
NALAEIRRLR LGEGDATALM KYFSKKVKEN SGFYFEVDYD DENQLRNVFW ADGWSREAYK  240
EFGEVISFDA TYMTNDYEMP FTSFFGVNHH GQSIFLGCGL LCNETTETFV RLFKKWLKCM  300
FGCAPREIIT DQCQAMKNAV EIIFPEARHR WCLWHIMKKI PEKFGSYKQG EKIAFALQEA  360
VYDSQTPAEF EESWKKMIDK YNLQQNTWLS NLYPEKEQWL PCFLKDTFWA GMASTQHRES  420
INAFFKGYVN SKTKLKQFVE LCEQALRAKV EKELKEDAES CTKAIPLISS YPFEKQLRDM  480
YTLVKFQEFQ KEIRGKIACE VVDFDEVTEV HKYVIREDIW LDNDFCKKVK FNVTFRKIET  540
NDDSSEEEDG DIAVEVVDDG EGMVDLETDN ESETDDNETN GSETESSGTD DSEKEECVFD  600
KRTDETEATK AKKRKKLVDF DIHCSCQMFE SRGILCKHVI VVLMRNGIRL IPEKYILRRW  660
RKNVTRPHTK LKVSFSCWEL NEQSLRYNQM CLKFSVLADL ASVNDKESKV VNEWLDNRTE  720
ELKAKSIELE KIKINAEDQG DTSAPSYGDP SKKKRRGRKR TKRLKSKRSW KRTKRNPSTK  780
PSQESVTTPT PSNPHDISHQ QHTEATRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	612	616	KKRKK
2	752	756	KKKRR
3	755	763	RRGRKRTKR
4	757	764	GRKRTKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-97	FAR1 family protein