PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382472.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YC
Protein Properties Length: 197aa    MW: 22623.6 Da    PI: 5.0496
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC154.81.6e-48641652100
           NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 
                     l+ fw++q   i++ +dfk+h+lPlarik+i+k+dedvkmisa+aPvl+skacelfileltlrswl++ee++rrtl++ dia+av+r ++ dflv
  XP_026382472.1  64 LQLFWHQQileIDQLSDFKQHNLPLARIKRIMKSDEDVKMISADAPVLFSKACELFILELTLRSWLNTEESRRRTLQRIDIANAVNRGEVLDFLV 158
                     89******98899********************************************************************************** PP

           NF-YC  94 divprde 100
                     d+vp ++
  XP_026382472.1 159 DVVPAND 165
                     ****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MDLNQSVHHY RCSSPAPIAQ VHNFMHVSSP MISLNNIQQQ YSPNNEMGEE SLQSRVLQLQ  60
RQNLQLFWHQ QILEIDQLSD FKQHNLPLAR IKRIMKSDED VKMISADAPV LFSKACELFI  120
LELTLRSWLN TEESRRRTLQ RIDIANAVNR GEVLDFLVDV VPANDSQDEE CEKNCGGAEL  180
SPSSNGLMNF AVFDHQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.22e-50NF-YC family protein