PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382416.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 318aa MW: 35501.4 Da PI: 6.7738

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.7e-05	136	155	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_026382416.1 136 FSCTVCHKTFNRYNNMQMHM 155 89*****************9 PP
2	zf-C2H2	14.6	9.3e-05	221	243	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+F + + ++H +++ XP_026382416.1 221 FSCQKCSKTFAVRGDWRTHEKNC 243 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MHHNFCMNEK PRSDVDEEDD EESIFLTLSP PGQHISKTHL SHQSSSTPKA VVANNIEGNH 60 DKNNIITSSC STTTTIEDES SVTIALHIGL PSAEVASTSK TNNTCSNNNG STTGNPLEGQ 120 YWIPSPSQIL VGPTQFSCTV CHKTFNRYNN MQMHMWGHGS QYRNGPDSLK GTKPLSPMMS 180 LPCYCCAEGC KNNIDHPRAK PLKDFRTLQT HYKRKHGVKP FSCQKCSKTF AVRGDWRTHE 240 KNCGKLWFCI CGSDFKHKRS LKDHIRAFGG NHAPHYGTCG DDLLCQDEND DGDGEDDEND 300 DDLPQQGNVV VRPGYMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-103	C2H2 family protein