PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382391.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-YC

Protein Properties

Length: 600aa MW: 68393.1 Da PI: 6.6612

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	133.4	6.9e-42	516	599	11	94
NF-YC 11 ekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvd 94 + +tdfknh+lPlari+ki+ka+edvk+i++e+Pv+l+ ace+fi +ltlrsw+h+ee kr+tl+k+di+aa+t++difdfl d XP_026382391.1 516 QLQTDFKNHSLPLARIRKIMKANEDVKRIASEVPVILAMACEMFISDLTLRSWNHTEERKRKTLQKNDIDAAITESDIFDFLAD 599 3469******************************************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MNMILPASSR SKMVSNLILM EDVLIEIFLL LPLKSIFRMR CVCKVCNYIL TNPCFIRRWI 60 QVNCCDQSLP WSLYYSYHDV PNDIRMRFLI TQLRSSRRSQ FLATDKHGFS FRFLKSVTNL 120 EELHLLGSSK GLVLCSSSDS VPTQYYVCNP ITKQWVTLPL TASGAKADCG IACELDSSGG 180 CFYQVVHIPT FTKNARKFKI EIFSSDVGKW KVNSVSRHRN IIGCCSSVSN VVIVGDTLYW 240 IECEKLMAYS LNRNNVDTGG ERFRLIDLPV VESEDSNGTR GNYCLGESEG FLCYAEILGN 300 QESGVWVFEE EWHLLRTNMD LRWLIGDMFG RFNENVCEDS DGKETRAFYE EENKAIHDVK 360 VLGFNPMNKH VTVLSYEYGV WSYNTGTSEY EELIEPKFVA KMHKNYKFHN RKAPYVDNPF 420 VMKAMATILP SPSWKNASDQ PGHGQPPDVG MVASAGQMPY GETQYPFNQI IGGPSVVSIQ 480 SPGQTVEFSA SQAQLVQHQL SYQQIHQQQQ PQLENQLQTD FKNHSLPLAR IRKIMKANED 540 VKRIASEVPV ILAMACEMFI SDLTLRSWNH TEERKRKTLQ KNDIDAAITE SDIFDFLADN

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MNMILPASSR SKMVSNLILM EDVLIEIFLL LPLKSIFRMR CVCKVCNYIL TNPCFIRRWI  60
QVNCCDQSLP WSLYYSYHDV PNDIRMRFLI TQLRSSRRSQ FLATDKHGFS FRFLKSVTNL  120
EELHLLGSSK GLVLCSSSDS VPTQYYVCNP ITKQWVTLPL TASGAKADCG IACELDSSGG  180
CFYQVVHIPT FTKNARKFKI EIFSSDVGKW KVNSVSRHRN IIGCCSSVSN VVIVGDTLYW  240
IECEKLMAYS LNRNNVDTGG ERFRLIDLPV VESEDSNGTR GNYCLGESEG FLCYAEILGN  300
QESGVWVFEE EWHLLRTNMD LRWLIGDMFG RFNENVCEDS DGKETRAFYE EENKAIHDVK  360
VLGFNPMNKH VTVLSYEYGV WSYNTGTSEY EELIEPKFVA KMHKNYKFHN RKAPYVDNPF  420
VMKAMATILP SPSWKNASDQ PGHGQPPDVG MVASAGQMPY GETQYPFNQI IGGPSVVSIQ  480
SPGQTVEFSA SQAQLVQHQL SYQQIHQQQQ PQLENQLQTD FKNHSLPLAR IRKIMKANED  540
VKRIASEVPV ILAMACEMFI SDLTLRSWNH TEERKRKTLQ KNDIDAAITE SDIFDFLADN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54830.3	2e-38	NF-YC family protein