PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382369.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

YABBY

Protein Properties

Length: 196aa MW: 21623 Da PI: 9.0447

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	166.1	2.5e-51	2	163	2	163
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvn...lakasqllaaeshldeslkeelleelkveeenlksnvekeesas 93 d++s se++Cyv+CnfC+t+lav vP + ++ +vtv+CG+C l ++ + + +++ +a ++ +s+ ++ + ++ ++++ ++ XP_026382369.1 2 DTHSHSEHLCYVRCNFCSTVLAVGVPWKRSVDTVTVKCGYCNCLSFLStrpVGQVHHQSTALEQ--QSMSPNTGGTFQHPPPPQGYFEHRKGGQT 94 67899*********************************987655550124444455555553..67778888888888888888899999999 PP YABBY 94 tsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +s+ss++l+ +++ ++ ++p v++PPe++ r Psaynrf+keeiqrik++nP+i hreafs aaknWa + XP_026382369.1 95 SSMSSSSLTFDQQPSS-NAPYVVKPPERKHRLPSAYNRFMKEEIQRIKTANPEIPHREAFSSAAKNWARY 163 9999999887776655.57889********************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MDTHSHSEHL CYVRCNFCST VLAVGVPWKR SVDTVTVKCG YCNCLSFLST RPVGQVHHQS 60 TALEQQSMSP NTGGTFQHPP PPQGYFEHRK GGQTSSMSSS SLTFDQQPSS NAPYVVKPPE 120 RKHRLPSAYN RFMKEEIQRI KTANPEIPHR EAFSSAAKNW ARYVPHSSGS SGASSSNTNE 180 RINAFGMGSL GDNNHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	4e-51	YABBY family protein