PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026382191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | Trihelix | ||||||||
Protein Properties | Length: 392aa MW: 45182.8 Da PI: 6.5229 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 60.2 | 5e-19 | 76 | 162 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt++ + +Li+++ + +e+ ++ l k++W++vs++m+++gf+++pkqC++k+ +lnkry+++ + + ++++++ ++ ++ ++ XP_026382191.1 76 KWTDETTNLLIKLVYYAGEERKSVILLKGKWKAVSQVMSDKGFSVTPKQCEDKFHELNKRYRRLIDLLGWDdACKVVEDHAVLKTMD 162 7**************************************************************999876554677777777777775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 392 aa Download sequence |
MEFEIISPEW EREDDRITPT LLGRRRSRRQ RDEINQMEGN TSSAGPMHVD HQQHPQTLHQ 60 QHTSQNLQGS SCQRIKWTDE TTNLLIKLVY YAGEERKSVI LLKGKWKAVS QVMSDKGFSV 120 TPKQCEDKFH ELNKRYRRLI DLLGWDDACK VVEDHAVLKT MDISLKAKAD VWKSLRSKHL 180 FFEETTSYYN GHLPSDPELR KSLQRALRRD DDHDTRNVLE DVNEDDSWTL DKHARHTSDS 240 VRDRVPLAIC GPILSGKSPP PDFPAEPYQF LVVNADQTTN QRLLDAAIRE KELADMASLR 300 VQLQREQELA RGLETQLADA KAEQGRVKSL EEEIVQLKNN EAQLNAKITN AEAATTELAR 360 QLAKAKEEYR TELAAKIKEG VKEFIDNIRR EL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 30 | GRRRSRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 3e-43 | Trihelix family protein |