PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382190.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 402aa MW: 46307 Da PI: 6.1213

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.2	5.2e-19	86	172	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt++ + +Li+++ + +e+ ++ l k++W++vs++m+++gf+++pkqC++k+ +lnkry+++ + + ++++++ ++ ++ ++ XP_026382190.1 86 KWTDETTNLLIKLVYYAGEERKSVILLKGKWKAVSQVMSDKGFSVTPKQCEDKFHELNKRYRRLIDLLGWDdACKVVEDHAVLKTMD 172 7**************************************************************999876554677777777777775 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MEINSNNEPE PEFEIISPEW EREDDRITPT LLGRRRSRRQ RDEINQMEGN TSSAGPMHVD 60 HQQHPQTLHQ QHTSQNLQGS SCQRIKWTDE TTNLLIKLVY YAGEERKSVI LLKGKWKAVS 120 QVMSDKGFSV TPKQCEDKFH ELNKRYRRLI DLLGWDDACK VVEDHAVLKT MDISLKAKAD 180 VWKSLRSKHL FFEETTSYYN GHLPSDPELR KSLQRALRRD DDHDTRNVLE DVNEDDSWTL 240 DKHARHTSDS VRDRVPLAIC GPILSGKSPP PDFPAEPYQF LVVNADQTTN QRLLDAAIRE 300 KELADMASLR VQLQREQELA RGLETQLADA KAEQGRVKSL EEEIVQLKNN EAQLNAKITN 360 AEAATTELAR QLAKAKEEYR TELAAKIKEG VKEFIDNIRR EL

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MEINSNNEPE PEFEIISPEW EREDDRITPT LLGRRRSRRQ RDEINQMEGN TSSAGPMHVD  60
HQQHPQTLHQ QHTSQNLQGS SCQRIKWTDE TTNLLIKLVY YAGEERKSVI LLKGKWKAVS  120
QVMSDKGFSV TPKQCEDKFH ELNKRYRRLI DLLGWDDACK VVEDHAVLKT MDISLKAKAD  180
VWKSLRSKHL FFEETTSYYN GHLPSDPELR KSLQRALRRD DDHDTRNVLE DVNEDDSWTL  240
DKHARHTSDS VRDRVPLAIC GPILSGKSPP PDFPAEPYQF LVVNADQTTN QRLLDAAIRE  300
KELADMASLR VQLQREQELA RGLETQLADA KAEQGRVKSL EEEIVQLKNN EAQLNAKITN  360
AEAATTELAR QLAKAKEEYR TELAAKIKEG VKEFIDNIRR EL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	40	GRRRSRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	4e-43	Trihelix family protein