PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382080.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 333aa MW: 37260 Da PI: 9.5437

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.6	6.8e-13	49	147	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm............rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 +W+++ +L+ea e+ +l+rg+l++++W+ v++ + ++ ++rs +qCk++++ l+k+yk +k++ + + + +s++p++d XP_026382080.1 49 CWSEEASCTLVEAWGERYLELNRGNLRQQHWQLVADTVnnrhannnnhshNKKFLRRSDVQCKNRIDTLKKKYKLEKARVLSSNGTYKSNWPLYD 143 7**********************************************66666799*****************99998888999** PP trihelix 84 qlea 87 ql+a XP_026382080.1 144 QLDA 147 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MKGEPEETLT SPPPLNFTPP GLSLAPPTSS ATPATPASTR TGLPIREDCW SEEASCTLVE 60 AWGERYLELN RGNLRQQHWQ LVADTVNNRH ANNNNHSHNK KFLRRSDVQC KNRIDTLKKK 120 YKLEKARVLS SNGTYKSNWP LYDQLDALIG NTVQPKKMMS VSPQSQPSPM GLPYYQQHRK 180 TPQQLPAMFV HPVTLRDKQK RSPPPPAGYV PPAVSRGIDE SFFRRNYSAV AAAAAAVDDV 240 GGDSDSSRSS GESDRGGQVD GFGELAKAIS AFADIYEKVE GARQRQMMEL EKERMEFMKS 300 LEYQRMQLFM DSQVQMEKIK RTKRDAAATA SDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	9e-35	Trihelix family protein