PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381935.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 384aa MW: 43808.1 Da PI: 6.6399

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.9	4.9e-27	65	146	2	85
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 W ++e++ Li +rre++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk+k+++++ + s+++++y+++l XP_026381935.1 65 WIQEEIRSLISFRREVDGFFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKTKHQDRG--CSSTTKMSYYNEL 146 ******************************************************************9..788889**998 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MYLSEKQRSD FYKGEARDIM MEVTVTSQQQ QQQQHQMLIG GGGDNQSSGG SDHEVKIPKK 60 RAETWIQEEI RSLISFRREV DGFFNTSKSN KHLWEQISSK MREKGFDRSP TMCTDKWRNL 120 LKEFKKTKHQ DRGCSSTTKM SYYNELLELL EERKKNAPYK SPTQPSLAKV DSYIQFSDKG 180 LEENSIPFGS VEASGRSNLN LERRLDHDGH PLAITATDGV AGNGVPPWNW RVNPENGGES 240 NSYGGRVISV KCGEFTRKIG IDGTADAIKE AIKSAFGLRT KRAFWLEDED EVVRSLDRDM 300 PLGTYALHLD EGLTIKICIY DDTDRLPMPS RCEEKTLYTE DDFRDFLSRR GWAGLRELSG 360 FRSVDTFNDL RPGVVYQGVR LLSE

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MYLSEKQRSD FYKGEARDIM MEVTVTSQQQ QQQQHQMLIG GGGDNQSSGG SDHEVKIPKK  60
RAETWIQEEI RSLISFRREV DGFFNTSKSN KHLWEQISSK MREKGFDRSP TMCTDKWRNL  120
LKEFKKTKHQ DRGCSSTTKM SYYNELLELL EERKKNAPYK SPTQPSLAKV DSYIQFSDKG  180
LEENSIPFGS VEASGRSNLN LERRLDHDGH PLAITATDGV AGNGVPPWNW RVNPENGGES  240
NSYGGRVISV KCGEFTRKIG IDGTADAIKE AIKSAFGLRT KRAFWLEDED EVVRSLDRDM  300
PLGTYALHLD EGLTIKICIY DDTDRLPMPS RCEEKTLYTE DDFRDFLSRR GWAGLRELSG  360
FRSVDTFNDL RPGVVYQGVR LLSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-160	Trihelix family protein