PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026381471.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 618aa MW: 70393.6 Da PI: 6.26 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77.4 | 1.8e-24 | 215 | 268 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026381471.1 215 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 268 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 37.9 | 4.1e-12 | 217 | 267 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_026381471.1 217 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 267 678***********************************************7 PP | |||||||
3 | Response_reg | 80.4 | 6.1e-27 | 35 | 143 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l++ y ev+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_026381471.1 35 VLVVDDDPTWLKILEKMLKRCSY-EVTTCCLARDALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 127 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el + XP_026381471.1 128 ACDYLLKPVRMKELKN 143 ************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 618 aa Download sequence |
MVMDQYHHHH RSMEINNNGY VSSPRSDSFP IGLRVLVVDD DPTWLKILEK MLKRCSYEVT 60 TCCLARDALD LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV 120 MKGVQHGACD YLLKPVRMKE LKNIWQHVLR KKIHEVRDIE SYEGNEEILF RNGSERFEEG 180 NFLLGSDLSS GKKRKETDNK ECDDQEYSDF SSVKKARVVW SVDLHQKFVN AVNQIGFDKV 240 GPKKILDLMN VPWLTRENVA SHLQKYRLYL SRLQKPNDPK SSFCGIKQPD FSQKDPPMTF 300 AHKSSSPVLQ NTAANGSFGY TSSNLLVEGA ALETHEGDLN GIISFKSVTE PRSRKTLNGD 360 VPSPRKANNS QIGFSHSLVL PELDVNNISF EANISQKHSW NREVPIMRMK QLPKQEQKLY 420 GYTHLALLSQ QNKIQSESLQ PSPSSINLGT SVGERDKACH LEIKPLHLED KSDDFKHGFP 480 TAPHISNLLQ ADAENTSSQE FRPILRINTD LPCMKLQGYN QHCTNTNAST WKPDQRNQIQ 540 GNESTSYCSQ QESHLGLLQD YLFIEDVELN NIASMNYHDP DMFADVPAHL LDKVRFTNDY 600 LCESTLEYPI MDQGLFIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-122 | ARR-B family protein |