PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026381114.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 338aa    MW: 39855.4 Da    PI: 10.6223
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026381114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF51.61.2e-161868151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krie+k +r+ +f +R+ ++lKKA  LS   + eva+iifss+gkl e+ss
  XP_026381114.1 18 KRIEDKAQRHLSFYRRKSTLLKKARDLSYDSENEVALIIFSSEGKLSEFSS 68
                    79***********************************************96 PP
2K-box76.38.4e-2610018416100
           K-box  16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     +  q++ +Lk++ e Lq++ R+l+Ge+Le+L ++eL qLe+qLe  lk++Rs K++ ++ ++ elq+ke++++e+nk+L+kk+ee
  XP_026381114.1 100 EALQDYLQLKARAEVLQQNYRNLQGEGLETLRFEELDQLENQLEVTLKQVRSEKTQSMFGHLAELQQKEQMQREANKTLSKKMEE 184
                     456899****************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MNNLEIQHRG RGKKRDIKRI EDKAQRHLSF YRRKSTLLKK ARDLSYDSEN EVALIIFSSE  60
GKLSEFSSTS SMLETLEKYE RIKGILPVSS EPVVNDIEDE ALQDYLQLKA RAEVLQQNYR  120
NLQGEGLETL RFEELDQLEN QLEVTLKQVR SEKTQSMFGH LAELQQKEQM QREANKTLSK  180
KMEEDNAETA LRLSWKVAEQ QRQQGMDEDK ADMALQLSWH YNCHGKRVNS KGSSRLTKIR  240
QKWHYNCHGK RMNSKGSSRL TKKRQKWHYN CHGKRMNSKG SSRLTKIRQK WHYNCHGKLM  300
NSKGSSRLTK IRQKWHYNCH GKRMNSKGSS RLTKIRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.22e-37MIKC_MADS family protein