PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380870.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family YABBY
Protein Properties Length: 208aa    MW: 23267 Da    PI: 8.174
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY240.63.2e-74121793170
           YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelle.elkveeenlksnvekeesastsv 96 
                     ++  s++vCyv+CnfCntilavsvP ts+f+vvtvrCGhC++llsvn+   sq+l++   ++++  ++ ++ +l +++ nl+  ++++e  ++s 
  XP_026380870.1  12 LDVPSGHVCYVHCNFCNTILAVSVPGTSMFNVVTVRCGHCANLLSVNMGSVSQTLPSPPSISHHQDHNNHQyHLLHQNWNLSHDDTSKEYGMASY 106
                     567899****************************************************9998877665544145555667777788888888888 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     + +k s +++e  pr+ p irPPekrqrvPsaynrfikeeiqrikasnPdi+hreafs aaknWahfP+ihfgl
  XP_026380870.1 107 KCNKPSVQNEEPPPRMLP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDITHREAFSSAAKNWAHFPHIHFGL 179
                     888889999999999999.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSQQSSSSSS SLDVPSGHVC YVHCNFCNTI LAVSVPGTSM FNVVTVRCGH CANLLSVNMG  60
SVSQTLPSPP SISHHQDHNN HQYHLLHQNW NLSHDDTSKE YGMASYKCNK PSVQNEEPPP  120
RMLPIRPPEK RQRVPSAYNR FIKEEIQRIK ASNPDITHRE AFSSAAKNWA HFPHIHFGLT  180
VDSNKQAAKV DDAFIAGDQG TQKTQQFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.14e-57YABBY family protein