PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380569.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 290aa MW: 33517.8 Da PI: 7.0487

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.3e-17	36	129	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y eY+++ GF+v++++++++ + +e+t + +vCs+eg++ + ++ +k++r+ ++ ++gC+ k+++ +++ ++ w+v+ ++ eHnH+++ XP_026380569.1 36 EYYTEYGRHNGFTVQVRSTNRTrRGVEEVTAAYMVCSREGNKVKVSNIegVDKKSRSCNTIQCGCTSKMQILLNEeNNMWVVMAFSDEHNHKFV 129 69**********999988883556889999****999877766678888899999********999*************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MDELVDHDTL TPNKNNNSLE TPHEGMQFNS YEEAREYYTE YGRHNGFTVQ VRSTNRTRRG 60 VEEVTAAYMV CSREGNKVKV SNIEGVDKKS RSCNTIQCGC TSKMQILLNE ENNMWVVMAF 120 SDEHNHKFVS PRKRMRMRSN KCMPGGVKDL AEKFNIQNLE VGKIPAILEG QNIGFNKRDC 180 WNHLRNVRHK NLELGDAQSV IDYLHKKQGE NPQFFYRVQV DEHGRAVNFF WVDARSRLSY 240 EQFGEDETEP TFLWLFSIWL EAMGEQHPLT IITDQDSAMA GAIKKVAVKA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	138	RKRMRMR
2	133	138	KRMRMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-37	FAR1 family protein