PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380530.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 685aa MW: 79236.9 Da PI: 7.744

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.6	2.3e-14	58	142	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y +Y+ + GF+v +++++ + g tf Cs+e kr++++k+ r ++ ++ t+C+ak++ ++ dg ++++ ++leHnH+l+p XP_026380530.1 58 YYTNYGIQQGFRVNRRSTRCD-DYGILRYFTFACSREKKRASTSKN----RYSNLTSGTNCQAKIRTIMQCDGSFKLSGVVLEHNHPLTP 142 8**********99987776.88889999********9888....99***********9999**************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MESTRIDMLA VEEEGVCDVN VGNGQWQQGN EQHLEGSEKL EEPKVGMVFS SQDDVYHYYT 60 NYGIQQGFRV NRRSTRCDDY GILRYFTFAC SREKKRASTS KNRYSNLTSG TNCQAKIRTI 120 MQCDGSFKLS GVVLEHNHPL TPGETRCFKY KKLDQDAKTR VRQQSRTSDI VQTGVCETLM 180 VGDKRSRNNY GQVKTSILEE GDDAVLQNFF VKMQTSNSNF FYVMDMDEEC TVRNIFWADA 240 RSRAAYEDFG DVVTLDTSYL RNKFALPLVP FVGVNHHGQS VLLGYALLKN EDVGTFLWLF 300 KSWLACMMGI PPKAIITDQS QAIQKAVQTV FPNVQYRWCL WQVMKTTREK LKGCSQYKAI 360 KISLENSVCE STSKDEFEDE WRKVIEKYGL HDNEWLKELY VERHRWVPVY TKETFWAGMS 420 TARRSESSCA LFNGHVNSKT TLKQFLEQYD NIIRSKVEKE SRADYESLYS RYDCMTHYEI 480 EKQFQEVYTS AKFKEFQDEI MGKLYCYTSL VKEEDSIFVI QVTEHVKVGD SEKDAKFIVN 540 FSAVDCELNC TCHLFEFSGI ICRHTLSVLT QSKVQQVPSK YILSRWRKDI KRKCSFVKAS 600 YQDLDVNPSA QRYHEMCRYF HEVATMSADC KDQSITVMNA LHELKAKIGM RFSQSNVVAP 660 VVSPNGVNAN NQRRQEIRIC LAPCN

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MESTRIDMLA VEEEGVCDVN VGNGQWQQGN EQHLEGSEKL EEPKVGMVFS SQDDVYHYYT  60
NYGIQQGFRV NRRSTRCDDY GILRYFTFAC SREKKRASTS KNRYSNLTSG TNCQAKIRTI  120
MQCDGSFKLS GVVLEHNHPL TPGETRCFKY KKLDQDAKTR VRQQSRTSDI VQTGVCETLM  180
VGDKRSRNNY GQVKTSILEE GDDAVLQNFF VKMQTSNSNF FYVMDMDEEC TVRNIFWADA  240
RSRAAYEDFG DVVTLDTSYL RNKFALPLVP FVGVNHHGQS VLLGYALLKN EDVGTFLWLF  300
KSWLACMMGI PPKAIITDQS QAIQKAVQTV FPNVQYRWCL WQVMKTTREK LKGCSQYKAI  360
KISLENSVCE STSKDEFEDE WRKVIEKYGL HDNEWLKELY VERHRWVPVY TKETFWAGMS  420
TARRSESSCA LFNGHVNSKT TLKQFLEQYD NIIRSKVEKE SRADYESLYS RYDCMTHYEI  480
EKQFQEVYTS AKFKEFQDEI MGKLYCYTSL VKEEDSIFVI QVTEHVKVGD SEKDAKFIVN  540
FSAVDCELNC TCHLFEFSGI ICRHTLSVLT QSKVQQVPSK YILSRWRKDI KRKCSFVKAS  600
YQDLDVNPSA QRYHEMCRYF HEVATMSADC KDQSITVMNA LHELKAKIGM RFSQSNVVAP  660
VVSPNGVNAN NQRRQEIRIC LAPCN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-111	FAR1 family protein