PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379876.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 304aa    MW: 35498.8 Da    PI: 6.8735
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.12e-25119208190
            FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fYn+YA ++GFs+ +++++k   +  e+++rtf+C+++g r+++ k  e+++r++a  + +C+a ++++k+  g+w+vt++ +eHnH+l+
  XP_026379876.1 119 DFYNRYAGNTGFSIHRHTTNKYrVEPFEVIQRTFCCNRQGVRDTRAKPVEQRQRNQADIKANCNAAMVITKR-FGRWVVTRVIEEHNHKLV 208
                     6*************99888777245679********************************************.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MKMGSRRSLT NEFDLSLLND FDFSVWNARN NLAESCAKKD SQEFNEVPYE EEEVDMYDED  60
KNYCMETNEN IMPAYGVKNV ALDDAIVPLN STQELFEEEI NYIRPYMGKE FESQDEAYDF  120
YNRYAGNTGF SIHRHTTNKY RVEPFEVIQR TFCCNRQGVR DTRAKPVEQR QRNQADIKAN  180
CNAAMVITKR FGRWVVTRVI EEHNHKLVSP SKRHNMQSLR FISSSQKQVL VNKRLAGVKT  240
NQMMNYLTVE SGGVRNIGFL PKNARNFLST KRQLELKHGD AQAVLDYFEH QQVENPSFFL  300
FNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-31FAR1 family protein