PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379366.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 290aa    MW: 32497.4 Da    PI: 5.8816
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.76e-36101091100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     aCaaCk++rrkC+++C+l pyfpa+qpk f+n+h+lFG+sn+lk+++ lp++ +++am+s++y++++r +  v+G++++i +l+ q++q+k el+
  XP_026379366.1  10 ACAACKYQRRKCSNECPLKPYFPADQPKMFQNAHRLFGVSNILKIINPLPPNLKSEAMRSIIYQSNIRDKHRVHGCIAIIEQLNFQYQQAKLELD 104
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     +++++
  XP_026379366.1 105 AVNAQ 109
                     99987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MTVKGGTSQA CAACKYQRRK CSNECPLKPY FPADQPKMFQ NAHRLFGVSN ILKIINPLPP  60
NLKSEAMRSI IYQSNIRDKH RVHGCIAIIE QLNFQYQQAK LELDAVNAQL AICRQQYNQL  120
SPALPSSESS PSSQLQLGMG GPSNNNAMPL LNQHPYQMFD AIDNGNSNLT YNSSLDYIDN  180
KDNMMNPLRP QQPYMDNNNS NNSMVTHHQP QFMGQPIPLQ QLSLSDAPQD YDEMPTLFDT  240
IDDRQSFIGS KDPYESSPES SPKDTKESIE HISENELRNA AAGLSLTSVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.12e-46LBD family protein