PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026379366.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 290aa MW: 32497.4 Da PI: 5.8816 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 114.7 | 6e-36 | 10 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkC+++C+l pyfpa+qpk f+n+h+lFG+sn+lk+++ lp++ +++am+s++y++++r + v+G++++i +l+ q++q+k el+ XP_026379366.1 10 ACAACKYQRRKCSNECPLKPYFPADQPKMFQNAHRLFGVSNILKIINPLPPNLKSEAMRSIIYQSNIRDKHRVHGCIAIIEQLNFQYQQAKLELD 104 7********************************************************************************************** PP DUF260 96 llkee 100 +++++ XP_026379366.1 105 AVNAQ 109 99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MTVKGGTSQA CAACKYQRRK CSNECPLKPY FPADQPKMFQ NAHRLFGVSN ILKIINPLPP 60 NLKSEAMRSI IYQSNIRDKH RVHGCIAIIE QLNFQYQQAK LELDAVNAQL AICRQQYNQL 120 SPALPSSESS PSSQLQLGMG GPSNNNAMPL LNQHPYQMFD AIDNGNSNLT YNSSLDYIDN 180 KDNMMNPLRP QQPYMDNNNS NNSMVTHHQP QFMGQPIPLQ QLSLSDAPQD YDEMPTLFDT 240 IDDRQSFIGS KDPYESSPES SPKDTKESIE HISENELRNA AAGLSLTSVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47870.1 | 2e-46 | LBD family protein |