PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026379297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | YABBY | ||||||||
Protein Properties | Length: 196aa MW: 21623.1 Da PI: 8.8822 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 167.8 | 7.7e-52 | 1 | 163 | 1 | 163 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvn...lakasqllaaeshldeslkeelleelkveeenlksnvekeesa 92 +d++s se++Cyv+CnfCnt+lav vP + ++ +vtv+CG+C l ++ + + +++ +a ++ +s+ ++ + ++ ++++ + XP_026379297.1 1 MDIHSHSEHLCYVRCNFCNTVLAVGVPCKRSVDTVTVKCGYCNCLSFLStrpVGQVHHQSTALEQ--QSMSPNTSGTFQHPPPPQGYFEHRKGGQ 93 578999***********************************987655540124444555555554..6778888888888888888999999999 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ++s+ss++l+ +++ ++ ++p v++PPe++ r Psaynrf+keeiqrik++nP+i hreafs aaknWa + XP_026379297.1 94 TSSMSSSSLTFDQQPSS-NAPYVVKPPERKHRLPSAYNRFMKEEIQRIKTANPEIPHREAFSSAAKNWARY 163 99999999887776655.57889**********************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MDIHSHSEHL CYVRCNFCNT VLAVGVPCKR SVDTVTVKCG YCNCLSFLST RPVGQVHHQS 60 TALEQQSMSP NTSGTFQHPP PPQGYFEHRK GGQTSSMSSS SLTFDQQPSS NAPYVVKPPE 120 RKHRLPSAYN RFMKEEIQRI KTANPEIPHR EAFSSAAKNW ARYVPHSSGS SAASSSNTNE 180 RINAFGMGSL GDNNHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 8e-52 | YABBY family protein |