PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379267.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 321aa MW: 35879.9 Da PI: 6.8064

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.8e-05	139	158	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_026379267.1 139 FSCTVCHKTFNRYNNMQMHM 158 89*****************9 PP
2	zf-C2H2	14.6	9.5e-05	224	246	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+F + + ++H +++ XP_026379267.1 224 FSCQKCSKTFAVRGDWRTHEKNC 246 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MHHNFCMNEK PRSDVDEEDD EESIFLTLSP PGQHISKTRL SHLHHQSSST PKAVVANNIE 60 GNHDKNNIIT SSCGTTTTIE DESSVTIALH IGLPSAEVAS TSKTNNTCSN NNGSTTGNPL 120 EGQYWIPSPS QILVGPTQFS CTVCHKTFNR YNNMQMHMWG HGSQYRNGPD SLKGTKPLSP 180 MMSLPCYCCA EGCKNNIEHP RAKLLKDFRT LQTHYKRKHG VKPFSCQKCS KTFAVRGDWR 240 THEKNCGKLW FCICGSDFKH KRSLKDHIQA FGGNHAPHYG TCGDDLLCQD ENDDGDGEDD 300 ENDDDLPQQG NVVVRPGYMY Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-103	C2H2 family protein