PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026379230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YC | ||||||||
Protein Properties | Length: 197aa MW: 22627.6 Da PI: 5.5324 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 154.8 | 1.6e-48 | 64 | 165 | 2 | 100 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 l+ fw++q i++ +dfk+h+lPlarik+i+k+dedvkmisa+aPvl+skacelfileltlrswl++ee++rrtl++ dia+av+r ++ dflv XP_026379230.1 64 LQLFWHQQileIDQLSDFKQHNLPLARIKRIMKSDEDVKMISADAPVLFSKACELFILELTLRSWLNTEESRRRTLQRIDIANAVNRGEVLDFLV 158 89******98899********************************************************************************** PP NF-YC 94 divprde 100 d+vp ++ XP_026379230.1 159 DVVPAND 165 ****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MDLNQSVHHY RCSSPAPIAQ VHNFMHVSSP MISLNNIHRQ YSPNNEMGEE NLQSRVLQLQ 60 RQNLQLFWHQ QILEIDQLSD FKQHNLPLAR IKRIMKSDED VKMISADAPV LFSKACELFI 120 LELTLRSWLN TEESRRRTLQ RIDIANAVNR GEVLDFLVDV VPANDSQDEE CEKNCGGAEL 180 SPSSNGLMNF AVSDHQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 2e-50 | NF-YC family protein |