PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379133.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 233aa    MW: 25465.6 Da    PI: 7.8245
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.51.5e-40191191100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+k+C++apyf +eq + +fa+vhk+FGasnv+kll +lp ++r da+ +++yeA  r+rdPvyG+vg+i++lqqq+ +l+ael
  XP_026379133.1  19 PCGACKFLRRKCVKGCIFAPYFDSEQgSTHFAAVHKVFGASNVSKLLLRLPAHKRVDAVVTICYEALSRIRDPVYGCVGHIFALQQQVVNLQAEL 113
                     7***********************9988******************************************************************* PP

          DUF260  95 allkee 100
                     a ++++
  XP_026379133.1 114 AFVQAH 119
                     *99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MMMSSGSSSS SSSNGGNGPC GACKFLRRKC VKGCIFAPYF DSEQGSTHFA AVHKVFGASN  60
VSKLLLRLPA HKRVDAVVTI CYEALSRIRD PVYGCVGHIF ALQQQVVNLQ AELAFVQAHL  120
STLELTSHQQ HSFVSSPTPS SALTTVHASS DMLSSETSNM STLFTSYQSQ HQQLDGIPTM  180
LDTRRYCNPP TIAAQYQQQQ NNVDGDGDLQ TLAREFLSKY FPESAKLQTS NSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00210.13e-64LBD family protein