PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026378309.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 479aa MW: 55983.1 Da PI: 6.1685

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026378309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.7	8.8e-09	53	100	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkk 47 ++Y eY+++ GFsvr+++++k++ +e+t+ +vC +egk+++e++ XP_026378309.1 53 EYYTEYGRRNGFSVRVRSTNKTRVgVDEVTSVYMVCAREGKKKKEENI 100 69************999999641578*************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MDEPPNTFTC GDDQVQSDET EAMNHSSNGK NDVSNLESPY EGMHFNTREE AQEYYTEYGR 60 RNGFSVRVRS TNKTRVGVDE VTSVYMVCAR EGKKKKEENI EGIDKKGRSC STIKFFYAVQ 120 VDEEGRAVNF FWVDARSRMS YEQFGEVVFC DTTYRANKYE MPFAPFTGVN HHYQTIQFGC 180 ALLQDETKVT FSWLFSIWLE AMGGKHPSAI ITDQDDAMAF AVKKSKFKKD VKKCLHHTYK 240 IKDFEEKWNI MIEVFGLSNN DWLKTLYEIR ESWVPVYHRG TFYAGMNTTG RNEGVNAFFN 300 EFVSSKTNLK EFVIRYDQAL KKIVDREIEE DYVSEHTKRI IDERNLILKH ATEIYTRNMF 360 GKFREQLLES IRFKSEEIDR GDEFNTYLVK YKVGGFQEFI VKVKPDTYEG YCECQYFEFK 420 GLPCKNVLKV LGKLEVDEIP PHFILKRWLK GANSFRGVDE TDKSDGYDCS VAYRLSYLC

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MDEPPNTFTC GDDQVQSDET EAMNHSSNGK NDVSNLESPY EGMHFNTREE AQEYYTEYGR  60
RNGFSVRVRS TNKTRVGVDE VTSVYMVCAR EGKKKKEENI EGIDKKGRSC STIKFFYAVQ  120
VDEEGRAVNF FWVDARSRMS YEQFGEVVFC DTTYRANKYE MPFAPFTGVN HHYQTIQFGC  180
ALLQDETKVT FSWLFSIWLE AMGGKHPSAI ITDQDDAMAF AVKKSKFKKD VKKCLHHTYK  240
IKDFEEKWNI MIEVFGLSNN DWLKTLYEIR ESWVPVYHRG TFYAGMNTTG RNEGVNAFFN  300
EFVSSKTNLK EFVIRYDQAL KKIVDREIEE DYVSEHTKRI IDERNLILKH ATEIYTRNMF  360
GKFREQLLES IRFKSEEIDR GDEFNTYLVK YKVGGFQEFI VKVKPDTYEG YCECQYFEFK  420
GLPCKNVLKV LGKLEVDEIP PHFILKRWLK GANSFRGVDE TDKSDGYDCS VAYRLSYLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-78	FAR1 family protein