PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026378114.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 635aa MW: 72980 Da PI: 8.3533

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026378114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5.4e-20	37	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 fY+eY+++ GFs+rk++s+ s + g i k fvC +eg ++ + +k+++++++ rt+Cka++++ ++ + w+ + + XP_026378114.1 37 FYKEYGRSKGFSTRKTSSYASANRGGISKVIFVCGCEGVYGKDPNYddsnsfdddeveqeVVKRKKNTSTMRTNCKAMMRIALDVkCKIWYTNAF 131 9***********************************999888878999***99888888999999********99899*** PP FAR1 82 eleHnHela 90 + eHnH ++ XP_026378114.1 132 VDEHNHVMV 140 ****886 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
METTIGNNET GCNDMSSKDL KPAVGLEFSS IEIADLFYKE YGRSKGFSTR KTSSYASANR 60 GGISKVIFVC GCEGVYGKDP NYDDSNSFDD DEVEQEVVKR KKNTSTMRTN CKAMMRIALD 120 VKCKIWYTNA FVDEHNHVMV SPKKRVLMRS NKYMLSEANS LAGAFNKNRL PVGKIASLFG 180 HSENNTFTPR EVYNHLRMVR KSLLDVGDAE ALLDYFRKRT IENPSFYYAI QVDEVGRAEN 240 LFWVDARSRM AYSRFADAVT FDTTYRTNKY NMPFAPFIGT NLDLHYSEIR QKRLLHGCLR 300 RGLKKWEVPP PFNIIHISNF IDLNQTSLRQ LVESCDQALE RMYVREREED YKSIHMKRIF 360 ASQDLLVRHA SKVFTRVIFN KVHDEFNASL KYQSKIIEVN GDEHSYKVFW KVDEDIVEEF 420 PLKINALTKS GTCGCQNFEF KGISCRHLHH ILVSRLYETE IPPHFIMERW TINANKCAVL 480 GSDRLEINDD KVGIEAMRIS HCCRRSSKLA YMFLGKSEKA YEMAMDFLNQ AFEKAREIDN 540 VELEKEHGED ITIDQACTNA VEVPDDVSNA TTAAKMILGD PRISQTKEWY RTVPDKKKPR 600 TYKYFKYEGH DPRTCKQKKA DQLAAASANS GSGTA

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

METTIGNNET GCNDMSSKDL KPAVGLEFSS IEIADLFYKE YGRSKGFSTR KTSSYASANR  60
GGISKVIFVC GCEGVYGKDP NYDDSNSFDD DEVEQEVVKR KKNTSTMRTN CKAMMRIALD  120
VKCKIWYTNA FVDEHNHVMV SPKKRVLMRS NKYMLSEANS LAGAFNKNRL PVGKIASLFG  180
HSENNTFTPR EVYNHLRMVR KSLLDVGDAE ALLDYFRKRT IENPSFYYAI QVDEVGRAEN  240
LFWVDARSRM AYSRFADAVT FDTTYRTNKY NMPFAPFIGT NLDLHYSEIR QKRLLHGCLR  300
RGLKKWEVPP PFNIIHISNF IDLNQTSLRQ LVESCDQALE RMYVREREED YKSIHMKRIF  360
ASQDLLVRHA SKVFTRVIFN KVHDEFNASL KYQSKIIEVN GDEHSYKVFW KVDEDIVEEF  420
PLKINALTKS GTCGCQNFEF KGISCRHLHH ILVSRLYETE IPPHFIMERW TINANKCAVL  480
GSDRLEINDD KVGIEAMRIS HCCRRSSKLA YMFLGKSEKA YEMAMDFLNQ AFEKAREIDN  540
VELEKEHGED ITIDQACTNA VEVPDDVSNA TTAAKMILGD PRISQTKEWY RTVPDKKKPR  600
TYKYFKYEGH DPRTCKQKKA DQLAAASANS GSGTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-39	FAR1 family protein