PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378110.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 412aa    MW: 45550.6 Da    PI: 9.0648
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023295317123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cgk F++   L  H r+H
  XP_026378110.1 295 HECKICGKAFPNGWALGGHKRSH 317
                     78**************9999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MTMKTLRILV GNEVIQVLKL SEERSRRSEN YLSRNSCSDS KEKSSITTSD GRRNSPSISD  60
DEKRSSHSAS VNQSNSPSIS VGQKRSSPSI SDGQKRSSPS TSDSQSNSPS TSKGEFSRWG  120
ETAKRGRRSS STSAAASHSS DNLKEPVFGE KELVDTLMHL WALSNSYSLD PAKKERRNAD  180
KKRKFEDTNI VHYTEEDGLK KARIENYRDD EIMLDSAKKM NLEATHKQIP ILSTAGSRKF  240
SCGNCGKSFS CHQALGGHKS TCNSSFLIRE VGESSLQGLM RNKNKNSATS KGGPHECKIC  300
GKAFPNGWAL GGHKRSHRTG QVEPSRRSTV SPPKEITKES LHPINSFTQS VPEAQDESLR  360
LVSSFKSSVP EAQEDTVAED KKIMMFDLNQ SPPKDEDEFD ELLLCLEPPI PF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46080.11e-14C2H2 family protein