PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377874.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 986aa MW: 110699 Da PI: 7.2954

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377874.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.4	3.8e-08	216	271	18	73
trihelix 18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 ++ +rgk + + +ev++++ + g++r +k+ kw+n+ ++++k+ e+ek ++ XP_026377874.1 216 TTTTGRGKTRSEKDREVAEFLNRNGVNRDAKTSGTKWDNMLGEFRKVYEWEKTSNE 271 55677899999999*************************************98533 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MGDKIREEGV VTKIQEDLVE ESSNEVLPQQ QQQQQHSIVV NTSSLISTES LYIAPPPNVL 60 VVGGGSGSST TSSQFEHHQD EIVNPKRPKF GAGQWKKIIP SPHQQRQQQQ HHQKMFSSPS 120 PNDHQQTLAV EIPTSTPHTT QTSTSSTPPT TATSSPISPS QETNKPFQIR KGKFVSPVWK 180 PNEMLWLAKA WRAQYQYQDN DNNQDDIVSI STSSNTTTTG RGKTRSEKDR EVAEFLNRNG 240 VNRDAKTSGT KWDNMLGEFR KVYEWEKTSN EKEINVGNTK SYFRLSPYER KLHKLPASFD 300 EDVFNELSQF MGIRVRNTSS TTSSPHQNRS LVSNINNPIS SLPETTAGFP SLPQPPLPHS 360 FKEEHSADGT ICAEISGRLN KQSMESRGNE VITYGGPSSS TSTSREFRRI GRIRMTWEES 420 QQRGGGGVTA GRVKLQGLGF LNANELTFFD ETMAGCTMEA YQDGPLKGFS IDRFICGQQV 480 KVFGRRSNSS SNPSSGLSDR FQLGVTETSN IRSIPPWEYQ DPSEYYIGCL KVPPTSLPSL 540 FELSWHLQEP PSEELRFPLR KDVYRDLPQG KELFFTTTAE LLDCRAITFD ILSPIVRSNL 600 SISISTATSR DSFISLWDDC INRVVSRFCS QEMVVVRKPC FSSSSSNECL QDQWPNVTGF 660 IRNLCLWRGE EIDKLREGNL HPSSSIIEKI LWTYTDLPYI LGYYAIGYSI TFCALSRSQD 720 RVIRTDLYSV DLSTPADRLK SLIPCWRIAG LLTLLAEHCF NSENIGRGLP YSDFEQQDIG 780 GGNLIEMTPN TVKRSFSSRR KFTAVKEIYD FLNRRIPHAE YIFTSSEKDL AITFKPRGCK 840 SKPINIEQLV ESLKFVTKAL VALHDLSFMH RDLSWEKVMK RSDGENEWFV SGFEEAVGAP 900 QIYPSGGVMV GARHAPEMGR GLHGVKVDVW GVGMLVKTSG LGVPLLLREL QNRCLDQNPE 960 LRPTAADCYH HLLQLQSSLC VAPGGF

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MGDKIREEGV VTKIQEDLVE ESSNEVLPQQ QQQQQHSIVV NTSSLISTES LYIAPPPNVL  60
VVGGGSGSST TSSQFEHHQD EIVNPKRPKF GAGQWKKIIP SPHQQRQQQQ HHQKMFSSPS  120
PNDHQQTLAV EIPTSTPHTT QTSTSSTPPT TATSSPISPS QETNKPFQIR KGKFVSPVWK  180
PNEMLWLAKA WRAQYQYQDN DNNQDDIVSI STSSNTTTTG RGKTRSEKDR EVAEFLNRNG  240
VNRDAKTSGT KWDNMLGEFR KVYEWEKTSN EKEINVGNTK SYFRLSPYER KLHKLPASFD  300
EDVFNELSQF MGIRVRNTSS TTSSPHQNRS LVSNINNPIS SLPETTAGFP SLPQPPLPHS  360
FKEEHSADGT ICAEISGRLN KQSMESRGNE VITYGGPSSS TSTSREFRRI GRIRMTWEES  420
QQRGGGGVTA GRVKLQGLGF LNANELTFFD ETMAGCTMEA YQDGPLKGFS IDRFICGQQV  480
KVFGRRSNSS SNPSSGLSDR FQLGVTETSN IRSIPPWEYQ DPSEYYIGCL KVPPTSLPSL  540
FELSWHLQEP PSEELRFPLR KDVYRDLPQG KELFFTTTAE LLDCRAITFD ILSPIVRSNL  600
SISISTATSR DSFISLWDDC INRVVSRFCS QEMVVVRKPC FSSSSSNECL QDQWPNVTGF  660
IRNLCLWRGE EIDKLREGNL HPSSSIIEKI LWTYTDLPYI LGYYAIGYSI TFCALSRSQD  720
RVIRTDLYSV DLSTPADRLK SLIPCWRIAG LLTLLAEHCF NSENIGRGLP YSDFEQQDIG  780
GGNLIEMTPN TVKRSFSSRR KFTAVKEIYD FLNRRIPHAE YIFTSSEKDL AITFKPRGCK  840
SKPINIEQLV ESLKFVTKAL VALHDLSFMH RDLSWEKVMK RSDGENEWFV SGFEEAVGAP  900
QIYPSGGVMV GARHAPEMGR GLHGVKVDVW GVGMLVKTSG LGVPLLLREL QNRCLDQNPE  960
LRPTAADCYH HLLQLQSSLC VAPGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-08	Trihelix family protein