PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377658.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 868aa MW: 100794 Da PI: 7.1831

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.2	7.4e-15	46	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YA +GF ++++skk +g + t++C ++gk+++++++ + ++ +++Ckakl + + kw++t ++ eH+H XP_026377658.1 46 EFYRKYAAATGFGCKTRSSKKD--EGILRHVTYTCVRNGKHKTTSTT---PFELDPTGKCECKAKLSAILGVNLKWRITVFVPEHTHMT 129 6***********99998887..9999**********99877...8889999****************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence
MDNDVGSKEN DFGLVETPNE DGRNRKCDIV VPKVGMEFDE VEEVYEFYRK YAAATGFGCK 60 TRSSKKDEGI LRHVTYTCVR NGKHKTTSTT PFELDPTGKC ECKAKLSAIL GVNLKWRITV 120 FVPEHTHMTS PSKTRFMRCN KLIKKSVKRK ILINDKAGLE MYKNFNICAA EAGGVEYLTY 180 DEKYLRNMVA KEKRLKLGEG DATALINYFE RMQNLNEDFF YRIDLGDDGR LRNVFWADKR 240 CREAYKEFGE VVTFDTTYLT NKYAMPFAPF VGVNHDGQST LFGCGLISNE EIDTFVWLFQ 300 AWLDCMKGSA PQAILTDQCS SMKAAVERVF PHAKHRWCLW HIMKKIPEKL SSHKKYQNIK 360 CRLKRAVYDT TSPTEFDQSW SEMLEKYPKL RSSRWLNTLY TEKHHWVPCY VNTTFWAGMS 420 TTQRSESMNA FFDGYVHSRT TLSEFVEQYD NALRSKVEKE LKADARSFSK VIPTTTSYEI 480 EEQMQNVYTI EKFQEIQKEL TKKIYCEIID VQDEIQDGIQ VTRYDVQQEI WYYRLPFVED 540 EDGNSTDEDA TTAAGSDQED IVEVNNIPTV EEGEEDEHNP KAKKVMKHVV FKVWYEKDEC 600 KVKCSCCMFE FRGLLCTHAL YVLLRNKVTS IPERYILRRW RKDVKLAHSK VSLSYDSWQL 660 TPEEKRYKEL CDYFAELADI ASRDDDECND IKNWIGEQLK LVTEKVPNTA KEVIHTEVNN 720 VIEVQNPRVV PTKGRPCKNT SKPKVYRKKK ANKGKENTEV LQEVPTQQNI MSTVQTRNIN 780 PIHEQYHQYQ LHTVGQFQNT QNMQFGVSQS YIGGYSGVPH ISPYRQVVNV APQQLDNICY 840 APTYGGFQLH EGAQEANVYH LASYPEHR

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence

MDNDVGSKEN DFGLVETPNE DGRNRKCDIV VPKVGMEFDE VEEVYEFYRK YAAATGFGCK  60
TRSSKKDEGI LRHVTYTCVR NGKHKTTSTT PFELDPTGKC ECKAKLSAIL GVNLKWRITV  120
FVPEHTHMTS PSKTRFMRCN KLIKKSVKRK ILINDKAGLE MYKNFNICAA EAGGVEYLTY  180
DEKYLRNMVA KEKRLKLGEG DATALINYFE RMQNLNEDFF YRIDLGDDGR LRNVFWADKR  240
CREAYKEFGE VVTFDTTYLT NKYAMPFAPF VGVNHDGQST LFGCGLISNE EIDTFVWLFQ  300
AWLDCMKGSA PQAILTDQCS SMKAAVERVF PHAKHRWCLW HIMKKIPEKL SSHKKYQNIK  360
CRLKRAVYDT TSPTEFDQSW SEMLEKYPKL RSSRWLNTLY TEKHHWVPCY VNTTFWAGMS  420
TTQRSESMNA FFDGYVHSRT TLSEFVEQYD NALRSKVEKE LKADARSFSK VIPTTTSYEI  480
EEQMQNVYTI EKFQEIQKEL TKKIYCEIID VQDEIQDGIQ VTRYDVQQEI WYYRLPFVED  540
EDGNSTDEDA TTAAGSDQED IVEVNNIPTV EEGEEDEHNP KAKKVMKHVV FKVWYEKDEC  600
KVKCSCCMFE FRGLLCTHAL YVLLRNKVTS IPERYILRRW RKDVKLAHSK VSLSYDSWQL  660
TPEEKRYKEL CDYFAELADI ASRDDDECND IKNWIGEQLK LVTEKVPNTA KEVIHTEVNN  720
VIEVQNPRVV PTKGRPCKNT SKPKVYRKKK ANKGKENTEV LQEVPTQQNI MSTVQTRNIN  780
PIHEQYHQYQ LHTVGQFQNT QNMQFGVSQS YIGGYSGVPH ISPYRQVVNV APQQLDNICY  840
APTYGGFQLH EGAQEANVYH LASYPEHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-92	FAR1 family protein