PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026377376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 272aa MW: 31198.2 Da PI: 8.7618 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15 | 7.1e-05 | 94 | 116 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++F+++ +L H + H XP_026377376.1 94 SCSVCSRVFPTSRLLSIHVSEaH 116 6*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MAMVAERNEL GFPYWNPVPR KFRPDSPFFT SGNIERELLA KQVALDITED EMYQLQDMED 60 EEVRALYCPI VGCGARLNSL EDFEGHYHAR HTASCSVCSR VFPTSRLLSI HVSEAHDSFF 120 QAKVARGYLM YECLVEGCEM KLKSYKSRQQ HLVDKHKFPM SFEFFKKAQA SKKHRQKKHH 180 KQKQPDKKNS SKISKKDVKE DDTEAEAEAE ASRMDVDKTI DSLVSGVSRL STSDYSPSSV 240 SFGRRRNQVF TFVSRAVQQD SKHNPSVKGS EK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14140.1 | 1e-97 | C2H2 family protein |