PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026377353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28371 Da PI: 9.0909 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.9 | 2.1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nr+vtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_026377353.1 9 KRIENKINRHVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 96.2 | 5.3e-32 | 81 | 175 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++s+ e+ + s++qe+ kLk+++e+Lqr+qR+llGedL++Ls keL+ Le+qL++slk+iRs++++++l+q+ +lq++e++l+e+nk+Lr++lee XP_026377353.1 81 NVSARESLEHSSHQEYLKLKARVETLQRSQRNLLGEDLGPLSGKELEFLEKQLDSSLKQIRSTRTQYMLDQLTDLQRREQMLSEANKSLRRRLEE 175 4446677778999******************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGRVELKR IENKINRHVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMFKTLERY QKCNYGQPET NVSARESLEH SSHQEYLKLK ARVETLQRSQ RNLLGEDLGP 120 LSGKELEFLE KQLDSSLKQI RSTRTQYMLD QLTDLQRREQ MLSEANKSLR RRLEEGAQAT 180 QQQWDMQHGV GYSRQQQSGH QAADQNETFF HPIECQPTLQ IGYHQQDQIT VAQGAPMSYM 240 PGWLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-113 | MIKC_MADS family protein |