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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM90103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 207aa MW: 24251.6 Da PI: 9.0427 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.4 | 9.4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+ vLCda+v++ii++s+gk++ey+s OWM90103.1 9 KRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIYASSGKMHEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 65.2 | 2.4e-22 | 71 | 164 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 y++ sgk+l++ak+e+l++e++++kke+++Lq ++Rhl+Ged++sL+++eL Le++Le++l+ +e+++++ +++++ e+e++e n L+++ + OWM90103.1 71 YHRLSGKRLWDAKHENLSNEVDRVKKENDSLQIKLRHLKGEDITSLTHRELIALEDALEQGLTC-----SEIVKTHRRNTKMLEEENKELNYILQQQQQ 164 778999********************************************************97.....89************************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGIIK KAKEITVLCD AKVSLIIYAS SGKMHEYCSP 60 STTLVDILEH YHRLSGKRLW DAKHENLSNE VDRVKKENDS LQIKLRHLKG EDITSLTHRE 120 LIALEDALEQ GLTCSEIVKT HRRNTKMLEE ENKELNYILQ QQQQREMAMA AENVKEAEYY 180 QRLRDYHSQG PFAFRVQPFQ PNLQDHM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 4e-83 | MIKC_MADS family protein |