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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM89777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 255aa MW: 29008.9 Da PI: 8.8499 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.3 | 1.5e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s OWM89777.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 95.5 | 8.7e-32 | 85 | 176 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ea + s+qqe+ kLk+++e Lqr+qR+l+GedL++Ls keL++Le+qL+ slk+iRs++++ +l+q+ elq+ke+ l+e+n++L+++l+e OWM89777.1 85 AQEALELSSQQEYLKLKAKYEALQRTQRNLMGEDLGPLSTKELESLERQLDASLKQIRSTRTQSMLNQLTELQRKEHLLNEANRTLKHRLME 176 455666789*******************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFCSS 60 SSMLKTLERY QKCNYGAPEP NTMSAQEALE LSSQQEYLKL KAKYEALQRT QRNLMGEDLG 120 PLSTKELESL ERQLDASLKQ IRSTRTQSML NQLTELQRKE HLLNEANRTL KHRLMEGYQL 180 QMNPAGAEDH QQHQHHMAYG VHHHQSPHQP PGNGAFFHPL DCEPTLQIGY QHDPGSVVTA 240 AGPSSATNFM PGWLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-122 | MIKC_MADS family protein |