PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89776.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MIKC_MADS
Protein Properties Length: 194aa    MW: 22134.1 Da    PI: 4.6515
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.73.1e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krie+ks rqvtfskRr g++KKA ELS+LCd+eva+++fss+g+lye++s
  OWM89776.1  9 KRIEDKSSRQVTFSKRRSGLIKKARELSILCDVEVALLVFSSRGRLYEFCS 59
                79***********************************************96 PP

2K-box33.81.5e-12941682599
       K-box  25 kkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 ++ +e Lq  qR +   d e+ sl++L++Le++   +l + Rs+K++l++e +  lq++e+ l+ee++ L+++++
  OWM89776.1  94 RSHTELLQLVQRLIEEPDAETFSLEDLMELEKDFSAALARTRSRKTQLMMEAMISLQEQERLLREEKELLEREVA 168
                 566778888888888889999**************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MGRKKLEMKR IEDKSSRQVT FSKRRSGLIK KARELSILCD VEVALLVFSS RGRLYEFCSG  60
NSLTSILERY QNYSEEEELK AADAQGCSSE NGGRSHTELL QLVQRLIEEP DAETFSLEDL  120
MELEKDFSAA LARTRSRKTQ LMMEAMISLQ EQERLLREEK ELLEREVAAL MAEDGAEEEA  180
GPSRDPPVTL DLLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132140ARTRSRKTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10140.22e-45MIKC_MADS family protein