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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM89776.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 194aa MW: 22134.1 Da PI: 4.6515 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.7 | 3.1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskRr g++KKA ELS+LCd+eva+++fss+g+lye++s OWM89776.1 9 KRIEDKSSRQVTFSKRRSGLIKKARELSILCDVEVALLVFSSRGRLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 33.8 | 1.5e-12 | 94 | 168 | 25 | 99 |
K-box 25 kkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ +e Lq qR + d e+ sl++L++Le++ +l + Rs+K++l++e + lq++e+ l+ee++ L+++++ OWM89776.1 94 RSHTELLQLVQRLIEEPDAETFSLEDLMELEKDFSAALARTRSRKTQLMMEAMISLQEQERLLREEKELLEREVA 168 566778888888888889999**************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MGRKKLEMKR IEDKSSRQVT FSKRRSGLIK KARELSILCD VEVALLVFSS RGRLYEFCSG 60 NSLTSILERY QNYSEEEELK AADAQGCSSE NGGRSHTELL QLVQRLIEEP DAETFSLEDL 120 MELEKDFSAA LARTRSRKTQ LMMEAMISLQ EQERLLREEK ELLEREVAAL MAEDGAEEEA 180 GPSRDPPVTL DLLR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 140 | ARTRSRKTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10140.2 | 2e-45 | MIKC_MADS family protein |