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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM86303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 258aa MW: 30056.1 Da PI: 9.5854 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.3 | 6.2e-26 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 rienk+ rqvtf+kRr+g++KK +ELSvLCda++ +i+fsstgkl+ y OWM86303.1 10 RIENKTTRQVTFAKRRAGLFKKTNELSVLCDAQIGLIVFSSTGKLFQYT 58 8*********************************************997 PP | |||||||
2 | K-box | 68 | 3.1e-23 | 81 | 171 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + + ++++ q el+++++e++nLq ++ h+ +dL++ +++L++Leqq+e sl+k+R++K+ell +q+++l++kek+lq+en+++ ++++ OWM86303.1 81 QPTDDQQQVQAELRRMRRETHNLQLSLQHYTANDLSTVRIEDLNNLEQQVEYSLNKVRARKYELLQQQTDNLRRKEKMLQDENEKIFHMIK 171 55677899****************************************************************************9988775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MGRGKIAIRR IENKTTRQVT FAKRRAGLFK KTNELSVLCD AQIGLIVFSS TGKLFQYTSE 60 ASSMEQIISR YLTATGSQMP QPTDDQQQVQ AELRRMRRET HNLQLSLQHY TANDLSTVRI 120 EDLNNLEQQV EYSLNKVRAR KYELLQQQTD NLRRKEKMLQ DENEKIFHMI KNQHQVVLEH 180 HQNEQLALVS DPKPEESRNV LDQFPFFGEE QPSSVLRLAA QLPPTFRPYH LQPTQPNLQD 240 FSLHQPNNGI SLRHLNLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 2e-67 | MIKC_MADS family protein |