PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86303.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MIKC_MADS
Protein Properties Length: 258aa    MW: 30056.1 Da    PI: 9.5854
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.36.2e-261058250
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                rienk+ rqvtf+kRr+g++KK +ELSvLCda++ +i+fsstgkl+ y 
  OWM86303.1 10 RIENKTTRQVTFAKRRAGLFKKTNELSVLCDAQIGLIVFSSTGKLFQYT 58
                8*********************************************997 PP

2K-box683.1e-2381171999
       K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 + + ++++ q el+++++e++nLq ++ h+  +dL++  +++L++Leqq+e sl+k+R++K+ell +q+++l++kek+lq+en+++ ++++
  OWM86303.1  81 QPTDDQQQVQAELRRMRRETHNLQLSLQHYTANDLSTVRIEDLNNLEQQVEYSLNKVRARKYELLQQQTDNLRRKEKMLQDENEKIFHMIK 171
                 55677899****************************************************************************9988775 PP

Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MGRGKIAIRR IENKTTRQVT FAKRRAGLFK KTNELSVLCD AQIGLIVFSS TGKLFQYTSE  60
ASSMEQIISR YLTATGSQMP QPTDDQQQVQ AELRRMRRET HNLQLSLQHY TANDLSTVRI  120
EDLNNLEQQV EYSLNKVRAR KYELLQQQTD NLRRKEKMLQ DENEKIFHMI KNQHQVVLEH  180
HQNEQLALVS DPKPEESRNV LDQFPFFGEE QPSSVLRLAA QLPPTFRPYH LQPTQPNLQD  240
FSLHQPNNGI SLRHLNLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.22e-67MIKC_MADS family protein