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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM85417.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 23721.9 Da PI: 8.484 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.1 | 1.9e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ien + r+vtfskRr g++KKAeELSvLCda+v +iifss gkl+e+ss OWM85417.1 10 KIENATARHVTFSKRRRGLFKKAEELSVLCDADVGLIIFSSAGKLFEFSS 59 69**********************************************96 PP | |||||||
2 | K-box | 44.6 | 6.2e-16 | 106 | 173 | 33 | 100 |
K-box 33 reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++R + Ge+L+ L+ L qLe++Le++lk++ +kK+e ++++i++lq+k el ++ +L+++++e OWM85417.1 106 HKLRLMRGEELQGLNTDKLDQLEKALEEGLKRVITKKTEKITTEIQDLQQKGTELALQKGKLSQQVAE 173 578999***********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MAREKICIRK IENATARHVT FSKRRRGLFK KAEELSVLCD ADVGLIIFSS AGKLFEFSSS 60 SMSDILERYR LLSKNLEKLQ QPSQDTPLLE NGGSSGLSKE VVDESHKLRL MRGEELQGLN 120 TDKLDQLEKA LEEGLKRVIT KKTEKITTEI QDLQQKGTEL ALQKGKLSQQ VAEIRRLKQV 180 AANSETSSEE DQSSELPTHG SSSNCSNTSL KLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-69 | MIKC_MADS family protein |